Pseudomonas cichorii: PCH70_27960
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Entry
PCH70_27960 CDS
T03002
Name
(GenBank) ABC transporter
KO
K13896
microcin C transport system ATP-binding protein
Organism
pci
Pseudomonas cichorii
Pathway
pci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCH70_27960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_27960
Transporters [BR:
pci02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
PCH70_27960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_22
AAA_16
AAA_29
nSTAND1
NACHT
DUF87
NTPase_1
TniB
ATP-synt_ab
Mg_chelatase
nSTAND3
AAA_5
NB-ARC
AAA_7
NPHP3_N
APS_kinase
RsgA_GTPase
AIG1
Sigma54_activat
SLFN-g3_helicase
FtsK_SpoIIIE
MobB
DUF6079_1st
AAA_30
MeaB
nSTAND_NTPase5
AAA_23
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AHF67949
LinkDB
All DBs
Position
3336804..3338399
Genome browser
AA seq
531 aa
AA seq
DB search
MIRDPEMSEKLIEIRNLNIAFGEQKVVSNLSLDICAGECLALVGESGSGKSVTAHSILQL
LPKKGTTSTGSITYRGQELIGASDRTLRELRGNRIAMIFQEPMTSLNPLHTVARQIGETL
LLHRGISGREAESRIIELLELVGIQQPQKRLKAYPHELSGGQRQRIMIAMALACEPELLI
ADEPTTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQT
DCQSLFKSPQHPYSRLLLDAEPAGEPLPRDTREKVLEVENLRVWFSLAGGILRRHKEYLK
AVDDVSLSIERGKTLGIVGESGSGKSTLGQAILRLLESRGSIRFRGQALDGLSQKQMRPW
RKEMQVVFQDPYGSLSPRMSVAQIISEGLEVHRKLDAQQCEAEVIRALEEVGIDPQSRHR
YPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQEKHGLTYLF
ISHDLAVVKALAHDLIVIKDGKVVEYGASHTIFDSPQHPYTRELLAAAHPG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgagaccctgaaatgtcagaaaagctgatcgaaatacgcaacctgaacatcgcc
ttcggtgagcagaaggtcgtcagcaacctgagcctcgatatctgcgcgggggaatgcctg
gcactggtgggcgaatccggatcgggtaaatccgtcacggcccactcgatcctgcaattg
ctacccaaaaaaggcacgaccagcaccggcagcatcacctatcgcggccaggaactgatc
ggtgccagcgaccggaccttgcgtgagttgcgaggcaatcggattgccatgatttttcag
gagcccatgacgtccctgaacccgctgcacaccgtcgcccggcagatcggcgagacgctg
ctcctgcatcgcggcatcagtggacgcgaggctgagtcccgaatcatagagttattggag
ctggtgggcatccagcagccgcaaaagcgcctcaaggcctaccctcacgaactgtccggc
ggccaacgccagcggatcatgatcgcaatggctctggcctgcgagccggaactgctgatt
gccgatgagccgaccaccgcactggatgtgaccgtacagcgcaagatcctgttgctgctc
aaggaactgcaacagcgcctgaacatgtcgctgctattgataagccatgatttgaatctg
gtgcatagcgtcgcccagcgggtttgcgtgatgcgcgccggtgaaatcgtcgagcagacc
gattgccagtcactgttcaaatcgccacaacacccttacagccgcctgttgctggatgct
gagcctgcgggcgagccgctgccacgggatacccgggaaaaggtgctggaagtcgagaat
ctgcgcgtctggttttccctggcgggcggtatcctgcgtcggcacaaggagtatctgaag
gccgtcgatgatgtcagcttgagcatcgagcgtggcaagacgctcgggatagtcggcgaa
tccggttcgggcaaatcgacacttggtcaggcaatcctgcgcctgctggagtctcgtggc
agtatccgctttcgaggacaggctctggatggcttgagtcagaagcagatgcgcccatgg
cgtaaagagatgcaggtggtgtttcaagacccttacggcagtctcagcccgcgcatgtca
gtggcgcaaatcatcagcgaaggcctggaagtccaccgaaaactggacgcacagcaatgt
gaggcagaagtgatccgggcgctggaagaagtcggcatcgacccgcaaagccgccatcgc
tatccccatgagttttccggcggccagcgccagcgtattgcgattgcccgggccctggtg
ctcaagccagccttgatactgctcgacgagcccacttcggcgctggatcgtacggtacaa
aaacaagtcgttgcactgctgcgcgacctgcaggaaaaacatggtctgacctatcttttc
atcagtcatgacctggccgtagtcaaggcgctggcccatgatctgatcgtgatcaaggac
ggcaaagtggtcgagtacggcgccagccacaccatcttcgattcgcctcagcatccttac
accagggaattgctggcggcagcgcacccaggataa
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