Pseudomonas cichorii: PCH70_28190
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Entry
PCH70_28190 CDS
T03002
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pci
Pseudomonas cichorii
Pathway
pci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCH70_28190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pci03021
]
PCH70_28190
Transcription machinery [BR:
pci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCH70_28190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_24
HTH_AsnC-type
PhyR_sigma-like
HTH_28
DUF2774
Motif
Other DBs
NCBI-ProteinID:
AHF67972
LinkDB
All DBs
Position
3365185..3365796
Genome browser
AA seq
203 aa
AA seq
DB search
MSGPWRLVAINAANRHHLIIIFISLRNMIPTSPDARPLSVRNRVLQQLFGDHHGWLQERL
RARLGCHHDAADMAAETFAQVVALPEPHAIREPRALLTTIAKRLIFASWRRRDLERAYLE
VLAQQPQGYEPSAEEQVQALEALSTIDQILDGLSPMGRSAFLYSQLDGMTYSEIGRALGI
SAPRVHQYVVKALGLCYLALEQR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggccatggcggcttgttgcaatcaatgcggcgaatcggcatcatttgataata
attttcattagccttcgtaacatgatcccgacctcccccgatgcccgccctctgagcgtg
cgtaaccgtgttctgcaacagttgttcggcgaccatcatggctggttgcaggagcgatta
cgtgcacgtctgggttgtcatcacgatgcagcagacatggcggccgaaaccttcgcccaa
gtggtcgccctgcccgagcctcacgccattcgtgaaccaagggcgttgctgacgaccatt
gccaagcgactgatttttgcttcgtggcggcgccgagatctggagcgggcttacctggaa
gtactggcgcaacagcctcagggctacgagccttccgccgaagaacaggtacaggcgctg
gaagccctgagcacgatcgaccagatactggatggcctgtcgcccatgggccgcagcgcc
tttctgtatagccagctcgatggcatgacctactccgaaatcggtcgcgcgctgggcatt
tccgcgccacgggttcatcaatacgtcgtcaaggcattgggcctttgctatctggccctg
gagcaacgatga
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