Pseudomonas cichorii: PCH70_30090
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Entry
PCH70_30090 CDS
T03002
Name
(GenBank) autotransporter, putative
Organism
pci
Pseudomonas cichorii
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GFIT
Motif
Pfam:
Autotransporter
Pertactin
VacA_C
Motif
Other DBs
NCBI-ProteinID:
AHF68162
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Position
complement(3586290..3588053)
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AA seq
587 aa
AA seq
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MYNGDLKANSGTVISGTVMGISVTQARPTAGPGNPSIELDNSHVIGQTGAAIVVARPFGT
SDSTTIVLKNGSTLVGGNGNILEVNGATTRMDVSGSALTGNVQLTDRGKLDLSLDQSSLT
GDVIAEEGSTANVALSNNSVLTGRLENLSSLAINSAAKWVMVEDSTVSNLAMDGGFIKMG
EPDAFYRLSVGNLSGNGTFIMDADFSQGKVDFLDVTGTATGNHSLLVGATGSDPLADSSM
HVVHTASGDAQFSLLNGPVDMGTYTYELSQQGGNDWYLVNTGKVSSGTGAVLALFNTAPT
VWYGELSTLRSRMGELRFKGGQPGGWIRAYGNKFDAKAASGVGYQQTQQGLSFGADAPLP
VGDGQWLVGLLGGYSKSDLSLGRGTSGQVNSYYVGAYTTWLDQDSGYYFDGVLKFNRFRN
EADVSLSDGSESKGDYDNSGVGASVEFGKHIKLDDGYFVEPYTQLAGLMVQGKDYALDNG
MRAEGDDTRSLVGKLGATAGRDFDLGEGRIAQPYIRAAYVHEFSEDNGVKINGNDFNNDL
SGARGELGAGIAVSMSDRLQLHADFDYSNGKKLEQPWGATIGLRYNW
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacggggatttgaaggccaatagcggtacggttatttccggtacggtgatgggt
atcagcgtcactcaagccagacccaccgcaggccccggtaatccttccattgaactcgac
aacagtcatgtcatcgggcagacaggagctgcaatcgttgtagccaggcctttcggtact
tctgactcgacaactatcgttttaaaaaacggctcaactctggtggggggcaacgggaac
attcttgaagtgaatggtgccacgaccagaatggatgtatcaggcagtgcgcttacaggg
aatgtccagctcactgacaggggcaagctggatttgagcctggatcagagcagcctcacg
ggcgacgtgatcgctgaagagggcagtactgcaaatgttgcactttccaataactccgtt
ctgacaggccgtcttgaaaacctcagcagcctggcgatcaatagtgccgcgaagtgggtg
atggttgaagactccacggtcagcaacctggcaatggatggcggtttcatcaagatgggt
gagccggatgctttctacaggttgtcggtgggcaatctgtcaggtaatggcacctttatc
atggatgccgatttctctcagggcaaagtcgactttctcgatgtgaccggtacggcaacc
ggcaatcactccttgctggtgggggcaaccggttccgatccgcttgccgactcctccatg
catgtggtgcataccgccagtggtgacgcgcagttctcgttgctcaacgggccggtagat
atgggcacctacacctatgaactcagccagcaaggcggcaatgactggtatctggtcaat
accggcaaggtcagttccggcactggcgcggtgctggcattgttcaatacggcgcctact
gtgtggtatggcgagttgtccaccctgcgcagccgtatgggtgagttgcgtttcaagggc
ggacagccaggcggctggattcgtgcctatggcaacaagtttgacgccaaggccgcgtcc
ggtgtcggctaccagcagacacaacaagggctctcttttggtgccgatgctccattgcca
gtgggtgacgggcagtggctggtcggtttgctgggtggttacagcaagtctgacctgagc
cttggtcgcggcaccagcgggcaggtcaacagctactatgtcggcgcttatacgacctgg
ctcgaccaggacagcggctactactttgacggtgttctcaagttcaaccgctttcgcaat
gaagccgatgtcagcctgagcgatggctctgagtcgaagggcgattacgacaacagtggt
gtgggtgcttccgtcgagttcggcaagcatatcaaactcgatgatggctatttcgtcgag
ccttacacgcaactggcaggcttgatggttcagggcaaggattatgctctggacaatggc
atgcgggctgaaggtgatgatacccggtcactggtcggcaagctgggtgctacggcaggt
cgtgatttcgatctgggcgagggcaggattgcccagccttatatccgtgccgcatacgtg
catgagttctctgaggacaatggcgtaaagatcaatggcaacgacttcaataatgatctt
tccggggcgcgaggtgaactgggtgccggtattgccgtttcgatgtcggaccggctgcaa
ctgcatgccgatttcgactacagcaatggcaagaaacttgagcagccatggggtgccact
atagggctgcgttataactggtag
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