Pseudomonas cichorii: PCH70_32230
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Entry
PCH70_32230 CDS
T03002
Name
(GenBank) transcriptional regulator
KO
K11474
GntR family transcriptional regulator, glc operon transcriptional activator
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_32230
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PCH70_32230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
FadR_C
HTH_36
TrmB
Rrf2
LexA_DNA_bind
HTH_50
RepL
Motif
Other DBs
NCBI-ProteinID:
AHF68376
LinkDB
All DBs
Position
complement(3864038..3864805)
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AA seq
255 aa
AA seq
DB search
MNGSKKPRPTQVADVVCERIERLIVDGVLKVGQLLPSERRLTEKLGVSRTALREGLKLLR
ARGIIETEQGKGSFVAHMNSQQQVSPLMHLFGSQPRTLYDLFEVRSLLEGESARLAALRG
TDADFVLITRSYDALVAAQSRELEASEHARLDHAFHLAICEASHNPVLVQTLRSLTDLLL
NTVYASVNNLYHREPQKRQIDRQHARLYNAVTGRLPEQARKAALAHIQSICENLREIENE
EQRLVRSTLRLQGWV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttctaagaagccgcggccgacacaagtggcggatgtggtctgtgaacgtatc
gagaggctgatcgtcgatggcgtcctgaaagtggggcagctcttgccctccgagcgtcgc
ctgaccgaaaagcttggcgtttcccgtacagccttgcgcgaagggctgaagctgctgcgg
gcgcgggggattatcgaaaccgagcagggcaaagggtcgtttgtcgcgcacatgaacagc
cagcagcaggtatcgccgctgatgcatctgttcggttcgcaaccgcgcaccctgtatgac
ctgtttgaagtacgcagcctgctggaaggcgaatcggcgcggcttgcggccttgcgcggc
accgatgcggattttgttctgatcacacgaagctatgacgctctggtggcggcccagagc
cgggagcttgaagccagtgaacacgctcgcctggatcacgccttccatctggcgatctgt
gaggcttcgcataatccggtgttggtgcaaaccttgcgctcgctcaccgacctgctgctc
aacacggtctatgcctcggtcaacaacctctatcatcgtgagccgcaaaagcgtcagatc
gaccgccaacatgctcgcctgtacaacgccgtgaccggccgtctccctgagcaggcccgc
aaggcggccctcgcacacatccagagcatctgtgaaaacctgcgggaaatcgaaaacgag
gagcagcgtctggtgcgctcgaccttgcgtctgcaagggtgggtttga
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integrated database retrieval system
