Pseudomonas cichorii: PCH70_33530
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Entry
PCH70_33530 CDS
T03002
Name
(GenBank) flagellar regulator FleQ
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pci
Pseudomonas cichorii
Pathway
pci02020
Two-component system
pci02025
Biofilm formation - Pseudomonas aeruginosa
pci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCH70_33530
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_33530
09142 Cell motility
02040 Flagellar assembly
PCH70_33530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_33530
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pci02035
]
PCH70_33530
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCH70_33530
Bacterial motility proteins [BR:
pci02035
]
Flagellar system
Flagellar assembly proteins
Others
PCH70_33530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHF68506
LinkDB
All DBs
Position
complement(3995740..3997215)
Genome browser
AA seq
491 aa
AA seq
DB search
MWREIKILLIDDDSQRRRDLAVILNFLGEENLSCSSQDWQQVVGSLASTREVLCVLVGSV
SAPGSLQGLLKTVAAWDEFLPVLLMGENSAVDLPEDLRRRVLSTLEMPPSYSKLLDALHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLENMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHAWPG
NVRELANLVERMAIMHPYGVIGVAELPKKFRYVDDEDEQMVDSLRSDLEERVAINAHTPN
FASGAVLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDDQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaatcaagattctgctaatcgatgacgatagccagcgccgccgggatctg
gcggttatcctgaattttctgggcgaagaaaatttatcctgttccagccaggactggcag
caggttgtcggttcattggcctctacgcgcgaagttctctgcgtactcgtgggaagcgtg
agcgctccaggtagcctgcaaggactccttaagacagtcgctgcatgggatgagttcctt
ccggtcctgttgatgggcgaaaattctgccgtcgaccttcctgaagacctgcgtcggcgc
gtgctttctacccttgaaatgcctcccagctacagcaaattgctggatgccctgcaccgt
gcccaggtttatcgtgaaatgtacgatcaggcccgcgagcgtggtcggcatcgcgaaccc
aatctgttccgcagtctggtaggcaccagtcgtgccattcagcacgtgcggcaaatgatg
caacaggttgctgataccgatgcaagcgtactgattctgggtgagtcgggtacgggcaag
gaggtggtcgctcgcaacctgcactatcactccaagcgtcgcgacgcgccttttgttccg
gtcaactgcggtgcgattccggccgaattgctcgaaagcgaattgttcggtcacgagaag
ggtgcctttaccggtgctatcaccagccgtgccggccgcttcgagctggccaatggcggt
actctgtttctggatgaaatcggtgacatgccgttgccgatgcaggttaagctgctgcgc
gttctgcaggagcgtacctttgagcgggttggcagcaacaagactcaaagcatcgatgtg
cgcatcattgccgcgacccacaagaatctcgagaacatgatcgagatcggcagtttccgt
gaagacctctattatcgtctgaacgtttttccgatcgagatggctccgttgcgtgagcgc
gtcgaagatattccgttgctgatgaacgagcttatctcgcgcatggagcacgaaaagcgc
ggttcgatccgtttcaattcggctgccatcatgtcgctgtgccgtcatgcctggccgggt
aacgtccgtgagcttgccaacctggtggagcgcatggcgatcatgcatccctatggcgtg
atcggtgtggcagagctgccgaagaaattccgctacgtcgatgatgaagacgagcagatg
gtcgacagcctgcgcagcgatctggaagagcgcgtggctatcaatgcccacacgccgaac
ttcgcttccggtgctgtacttcctccggaaggtctggacctcaaggattacctgggtggt
ctggaacagggcttgattcagcaggcgctggatgacgcaaacggtatcgtggcgcgtgct
gcggagcgtctgcggatccgtcgtacaacgcttgtagaaaagatgcgcaagtacggcatg
agtcgccgggaaggtgacgatcaggcggatgattga
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