Pseudomonas cichorii: PCH70_34240
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Entry
PCH70_34240 CDS
T03002
Name
(GenBank) rhomboid family protein
KO
K02441
rhomboid protease GlpG [EC:
3.4.21.105
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pci01002
]
PCH70_34240
Enzymes [BR:
pci01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
PCH70_34240
Peptidases and inhibitors [BR:
pci01002
]
Serine peptidases
Family S54: Rhomboid family
PCH70_34240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
NRho
Rhomboid_N
Motif
Other DBs
NCBI-ProteinID:
AHF68577
LinkDB
All DBs
Position
complement(4078449..4079321)
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AA seq
290 aa
AA seq
DB search
MNPVAVLRLPLSTDLTGFISFLQRLGVPHRVSEEAGEQVLWVPDVGQLAEEVRALYARFP
EGDDTYEFPPGAALTEVKRPGFAQQLRNSPMTALVLLATLIVAGLTLLGDDLDTVRWLTF
LDFQVQGEYAMFTPLADSLAAGEWWRIFTPMLIHFGILHLSMNGLWYWELGRRIELRQGR
WHLLGLTLLFAAFSNSVQYVFGGPSLFGGLSGVLYGLLGHCWIFQWLAPNPIYRMPRGVL
IMMLVWLVLCLSGLVSLLGFGDIANGAHVGGLIVGCFTGLVGGAIARRRA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgttgccgttctgcgattgcccttgagcaccgatctgacaggcttcatcagc
tttcttcagcgtttgggcgttcctcatcgggtcagcgaagaggcgggtgagcaagtgctc
tgggtaccggatgtcgggcaactggccgaagaagtgcgcgcgctgtacgcacgctttccg
gagggtgacgacacttatgagttcccaccgggcgccgctttgaccgaagtgaaacgtcca
ggcttcgctcaacagttgcgcaacagcccgatgaccgccctggtgctgctggcgaccctg
atcgttgccgggctcaccttgttgggggatgacctcgatactgtgcgctggctgacgttc
ctggactttcaggtccagggcgaatacgcgatgttcacgccccttgccgacagtctggca
gcaggggagtggtggcggatctttaccccgatgctgatccacttcggcattctgcatctg
tccatgaacggcctgtggtactgggagctgggacgacgtatcgaactgcgccaggggcgc
tggcacctgctgggtctgacgttgctgttcgccgcgttctccaactctgtccaatatgtt
tttggtggcccgagcctgtttggcgggttgtcgggtgttctttacgggttactggggcat
tgctggattttccagtggctggcgcccaacccgatctatcgcatgcctcgtggcgtgctg
atcatgatgctggtctggctggtgctctgcctgtccgggctggtgagcctgctgggtttt
ggagatatcgccaacggtgcccatgtcggtggcctgatcgttggttgttttacaggtctt
gtgggtggtgccattgcccgccgcagagcctag
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