Pseudomonas cichorii: PCH70_34490
Help
Entry
PCH70_34490 CDS
T03002
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pci03016
]
PCH70_34490
Enzymes [BR:
pci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PCH70_34490
Transfer RNA biogenesis [BR:
pci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCH70_34490
Prokaryotic type
PCH70_34490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHF68602
LinkDB
All DBs
Position
complement(4107628..4108482)
Genome browser
AA seq
284 aa
AA seq
DB search
MANIDNPAAEMAAEGFSRIALGVEYKGSRYCGWQRQASGVLTVQETLEDALSKVAASPVS
LMCAGRTDAGVHACGQVVHFDTRAERTMKAWVMGANINLPHDISVTWAKVMPSHFHARFK
AIARRYRYVIYNDQIRPAHLGQEITWNHRPLDVERMAEAAAYLVGTHDFSAFRAGQCQAK
SPVKQLHHLRVTRHGKMIVIDVRANAFLHHMVRNIAGVLMTIGAGERPVEWARDVLESRV
RRTGGVTAHPYGLYLVQVEYRDEFPLPERYIGPHFLTGFSELGG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaacatagataacccggccgccgagatggctgccgagggcttttcccgaatcgcg
ctgggcgtcgaatacaagggctcgcgctattgcggctggcagcgtcaggcgtctggcgtt
ctgacggtgcaggaaacccttgaggatgccttgtccaaagtcgcagcctcacctgtttca
ctgatgtgcgccgggcgtaccgatgccggtgtgcatgcctgcggtcaggttgtgcatttc
gataccagggctgagcgcaccatgaaggcctgggtcatgggggctaatatcaatctgccc
cacgatatcagcgtcacctgggccaaggtcatgccgtcccatttccatgcgcgcttcaag
gccattgcccgccgctatcgttacgtgatctacaacgatcagattcgcccggcgcacctt
ggccaggaaatcacctggaatcacaggccgctggatgtcgagcggatggccgaggctgcc
gcgtatctggtcggcacccatgacttcagcgcctttcgtgccgggcaatgccaggccaag
tcgccggtcaagcagttgcatcatttgcgcgtcacccggcatggcaagatgatcgtcatc
gatgtgcgggccaatgccttcctgcaccatatggtgcgcaatatcgcgggcgtgttgatg
accatcggtgcaggggagcggccggtggagtgggcgcgtgatgtgctcgaaagccgggtc
cgtcgcaccggtggtgtcacggcgcatccttacgggctgtatctggtgcaagtggagtac
cgggacgagtttccgttgccggagcgttatatcgggccgcactttcttacaggcttcagc
gaacttggcggctga
DBGET
integrated database retrieval system
