Pseudomonas cichorii: PCH70_34720
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Entry
PCH70_34720 CDS
T03002
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pci03009
]
PCH70_34720
Enzymes [BR:
pci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PCH70_34720
Ribosome biogenesis [BR:
pci03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PCH70_34720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
RepSA
Motif
Other DBs
NCBI-ProteinID:
AHF68625
LinkDB
All DBs
Position
complement(4128470..4129426)
Genome browser
AA seq
318 aa
AA seq
DB search
MTNIAPPTPGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRVPPVRVPERDEPVPVAQGLLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA
LVRGHWATAQKQVNAPLLKSNLRSGERMVEVNDEGKEALTIFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHSIAGDTKYGDEDFSREIRDLGGKRLFLHAYMLTVPLPDGGELKL
QAPVDEMWAKTVERLSAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatattgcccccccaacccccggcgttcagctggtagaggttgccccggaactt
gccggtcaacgcatcgataactttctgatcacttatctcaagggtgtgcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgtgtgaacaaggggcggatcaagcccgag
tacaagttgcaggcgggcgacatcgtgcgcgttccgcctgtgcgtgtgcctgagcgtgat
gagccggtaccggttgcacaaggtcttttgcagcgcctcgaggcggccattgtctatgaa
gacaaggccctgatcgtgctcaacaagccggccggcattgccgtgcatggcggtagcggc
ctgagtttcggtgtcatcgaagcctttcgccagttgcggcccgatgccaaggagcttgag
cttgtacacaggctggaccgcgacacttccggtctgctgatgatcgccaagaagcgcagc
atgttgcgccacctgcacgctgccttgcgtggcgacggtgtcgacaagcgctacatggcg
ctggttcgcggacactgggcgacggcccagaaacaggtcaatgcgccattgctcaaaagc
aacctgcgttccggtgagcgcatggtcgaggtcaatgacgaaggcaaggaggccctgacg
attttcaaggtcctgcgccgtttcggtgatttcgcgaccatggtcgaggccaagcctgtc
acggggcgtacccaccagattcgtgttcacacattgcatgccgggcattcgattgccggc
gataccaagtatggcgatgaagatttcagtcgcgagattcgcgacctgggcggcaagcgc
ctgttcctgcatgcctatatgcttaccgtgccattgccagatggtggcgaactgaagttg
caggccccggtcgatgagatgtgggccaagaccgtggagcgtttgagtgcgtcgtga
DBGET
integrated database retrieval system
