Pseudomonas cichorii: PCH70_37460
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Entry
PCH70_37460 CDS
T03002
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00541
Biosynthesis of various nucleotide sugars
pci00552
Teichoic acid biosynthesis
pci01100
Metabolic pathways
pci01250
Biosynthesis of nucleotide sugars
Module
pci_M01009
UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PCH70_37460
00552 Teichoic acid biosynthesis
PCH70_37460
Enzymes [BR:
pci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
PCH70_37460
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
adh_short
NAD_binding_4
CoA_binding_3
NAD_binding_10
ThiF
KR
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
AHF68899
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Position
complement(4412397..4414325)
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AA seq
642 aa
AA seq
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MLVWFALWMAFVVRLGVEDLINPLEKHTWLFISAPIVAIPLFIRFGMYRAVMRYFGNDAL
IAIIKAVTLSALILGCVVYLYSNHQHVVPRSVMFNYWWLSMVMIGGLRLAMRQYFLGDWF
VAGQHIPFSNRDDGLPKVAIYGAGAAGNQLVAALRMSRLMRPVAFIDDDKSISNRVISGL
QVYRPKHIQRMIEVTGAQEILLAIPSVSRGRRREILGFLEGFPLHVRSVPGFMDLAAGRV
KVDDLQEVDIADLLGRDSVPARENLLEHCIKGQTVLVTGAGGSIGSELCRQILELGPVKL
LLLDHSEFNLYSILSELEQRVTRESLRVKLLPILGSVRNHPKLLDIMKTWKVDTVYHAAA
YKHVPMVEHNIAEGIANNVIGTLNTAQAALQAGVSNFVLISTDKAVRPTNIMGSTKRLAE
LILQALSRETAPVILGDVANVHQVNKTRFIMVRFGNVLGSSGSVIPLFHKQIKSGGPLTV
THPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEPVRIVELAEKMIHLSGLSIRSE
KNPQGDISIEFTGLRPGEKLYEELLIGENVVATEHPMIMSANEDHLQWDVLKGRLKALLE
AVDKDDYNSVRQLLRETVSGYSPEGEIVDWIYQARRREPDFN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctggtctggttcgcactgtggatggcatttgtcgttcgcctgggtgttgaagacctg
attaaccctctggagaagcacacctggcttttcatcagtgccccgatcgttgccatcccg
ttgtttatccgcttcgggatgtaccgcgctgtcatgcgctacttcggcaacgatgcgctg
atcgccatcatcaaggccgtcacactctccgcgctcattcttggttgcgtggtctatctg
tacagtaaccatcaacacgtggttccccgttcggtcatgttcaactactggtggttgagc
atggtcatgatcggaggcctgcgtctggcgatgcgccaatactttcttggtgactggttc
gtggcggggcagcacatacctttcagcaatcgcgacgatggcctgcccaaggttgcgata
tatggcgcgggcgctgccggcaatcaactggtagccgccttgcgaatgagcaggctcatg
cgccccgtcgcttttatcgacgatgacaaatcgatctccaatcgagtgatttccgggctg
caggtctacagacccaaacatattcagcgcatgatcgaggtcaccggcgcccaggaaatc
ctgttggcgattccgtccgtatcgcgcggtcgccgccgggaaatcctcggctttctggaa
ggctttcctctgcatgtgcgaagcgttccgggcttcatggatctggccgcggggcgggtc
aaggtcgatgatctgcaagaggtcgacattgcggatctgctgggacgcgactccgtaccc
gccagggaaaacctgctcgaacactgcatcaaggggcagacggttctggtgacaggtgcc
ggtggttcgataggttcagagctgtgccggcagatactggagctggggcccgtcaagctg
ctgttgctcgatcacagtgagttcaatctctattcaatcctcagcgagcttgagcagcgt
gtgacgcgagagtctttgcgggtcaagttgctgcctatcctaggctccgtgcgtaatcat
cctaagctgctggatatcatgaaaacctggaaggtcgacacggtctatcacgcagccgcc
tacaagcatgtgcccatggtcgagcacaatattgcagaaggcatcgccaataacgtcatc
ggcacgctcaacaccgcacaggcggcgttgcaggcaggggtttccaacttcgtcctgatt
tccaccgacaaggctgtcaggcccaccaatatcatggggagcaccaagcgcctggccgag
ttgatcctgcaggccctgagccgtgaaaccgcaccggtgatcctgggcgatgtcgccaat
gttcatcaggtcaacaagacccgtttcatcatggttcgctttggtaatgtgctgggttct
tcggggtcggtgatcccgttgttccacaagcagatcaagtctggcgggccgctgacagtg
acccacccgaagatcacccgttacttcatgaccattcccgaggcggctcaactggtcatt
caggcgggctccatggggcaggggggggatgtctttgtcctggatatgggcgagcccgtg
aggatcgtcgaactggccgaaaaaatgattcacctgtcaggcctgagcattcgttcggag
aaaaaccctcaaggcgatatttccatcgagttcaccgggttgcgtccgggtgaaaagctt
tacgaggaattgctcatcggtgaaaacgtggttgccaccgagcacccgatgatcatgagc
gccaacgaagatcatctgcaatgggatgtgctcaaggggcgactgaaggcgttgcttgaa
gccgtggataaagatgattacaacagtgtccgccaattgctgcgggaaacagtcagtggc
tacagcccggaaggtgagattgttgactggatctatcaggcgcgccgtcgtgagccggac
ttcaactaa
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