Pseudomonas cichorii: PCH70_40560
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Entry
PCH70_40560 CDS
T03002
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pci
Pseudomonas cichorii
Pathway
pci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCH70_40560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_40560
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PCH70_40560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PCH70_40560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AHF69209
LinkDB
All DBs
Position
complement(4734598..4735281)
Genome browser
AA seq
227 aa
AA seq
DB search
MSAPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRNARGKAGTLARPFVPLEAEFRG
RGELKNVGRMEGAGVAIWLSGEALFSGMYLNELLIRLLPSEDPHPAVFDHYAATLTALAQ
GRPLEPLLRSFEWRLLDDLGYGFALDVDINGEPLAADGLYRLQVDAGLERVYLLQPGLFQ
GVELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccaaccggccaacctgcttatgtgcttcacagccgggcctatcgcgaaaac
agcgctctggtcgacttcctcacgcctcaaggccgtttacgcgccgtgctgcgtaatgct
cgtggcaaggccggtacgctggctcgtcctttcgtacctcttgaggccgagtttcgcgga
cgtggcgaactcaagaatgtcgggcgcatggaaggtgccggcgtagccatctggttgtcc
ggcgaggccttgttcagtgggatgtacctcaacgaactgctgattcgcctgttgccatcg
gaagatcctcatcccgccgttttcgaccactatgccgcgaccctgacagccttggcgcaa
ggtcgtcctcttgagcctctgttgcgttcattcgaatggcgactgctggacgatctgggc
tatggctttgcgctggacgtggatatcaatggcgagccgcttgctgccgatggtttgtat
cgcctgcaagtggatgcagggcttgagcgggtctatctgctgcagcccggactgtttcaa
ggcgttgagctactggccatggccgaggccgactggagcgctccgggtgcgctgtctgct
gccaagcgcctgatgcgtcaggcactggccgtgcatctgggcggacgtccattagtaagc
cgtgaactgtttcgcaagccgtga
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