Pseudomonas cichorii: PCH70_40580
Help
Entry
PCH70_40580 CDS
T03002
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pci03019
]
PCH70_40580
03009 Ribosome biogenesis [BR:
pci03009
]
PCH70_40580
03036 Chromosome and associated proteins [BR:
pci03036
]
PCH70_40580
Enzymes [BR:
pci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PCH70_40580
Messenger RNA biogenesis [BR:
pci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCH70_40580
Ribosome biogenesis [BR:
pci03009
]
Eukaryotic type
90S particles
RNase
PCH70_40580
Prokaryotic type
rRNA processing factors
PCH70_40580
Chromosome and associated proteins [BR:
pci03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PCH70_40580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AHF69211
LinkDB
All DBs
Position
complement(4736238..4736915)
Genome browser
AA seq
225 aa
AA seq
DB search
MSRLERQLGYTFKDQELMILALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQARE
GQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYL
DSGMEVARERVLAWLTNEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQGEPHC
RTFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcctggagcgtcagctcggctataccttcaaggatcaggaactgatgatcctg
gccctgacccaccgcagttttgctggccgcaataatgagcgtctggagtttctcggtgat
gcgatcctcaacttcgtagccggtgaagcactgttcgagcgctttccccaggcccgcgaa
ggccagttgtcgcgtttgcgcgcacgtctggtgaaaggggaaaccctggcattgctggcc
cgtggtttcgatctgggcgaatatctgcgtctgggctccggcgaattgaagagcggcggt
ttccgtcgcgagtcgatcctggccgatgcccttgaggcgttgatcggtgccatctatctc
gattcgggcatggaagttgcgcgtgagcgtgtcctggcatggctgaccaacgagttcgac
agcctgacactggtcgataccaacaaggacccgaaaacccgactgcaggaattccttcag
tcccgtgcctgtgaattgccgcgttacgaagtggtggatatccagggcgaaccgcattgc
cggacgtttttcgtcgaatgcgagatcaccttactgaatgaaaagagtcgaggtcagggt
gtcagccgtcgcattgccgaacaggtagccgcggccgcagcactcattgccctgggcgtg
gagaacggtcatgactga
DBGET
integrated database retrieval system