KEGG   Pseudomonas cichorii: PCH70_42240
Entry
PCH70_42240       CDS       T03002                                 
Name
(GenBank) rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pci  Pseudomonas cichorii
Pathway
pci03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pci00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PCH70_42240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pci02044]
    PCH70_42240
Secretion system [BR:pci02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCH70_42240
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AHF69377
LinkDB
Position
complement(4942332..4944623)
AA seq 763 aa
MLDANATHISLTLEGVSTDLQVLSFIGREALNQPYRFDVELVSSRPNLNLKELLHTRAHL
TFGATGKGIIHGLVYGIEQGDSGKTLTRYSITLVPQLAYLRHNHDQQIFQQLTVPEIIAQ
VLEARGILADAYSFQLGATYPERVYCVQYDESDLHFIQRLCEEEGIHFHFQHSASGHKLV
FGDDQTVFRKLVPVSYQQDSGMAAEKPVIKRFNLRLETRTTRVSRRDYDFEKPGLLPEST
AKSPFLPDLEDYDYPGRFTDRRRGKQLTTRALERHRSDYQLAEGQGDEPTLVTGHFMTLS
EHPRAEWNDLWLLLEVIHEGKQPQVLGENITSDVTDNKDDFHQGYRNRFLATPWDAHYRP
PLAHLKPLTIGSQTAIVTGPKGEEIHCDEYGRVKVQFFWDREGRGNDKTTCWLRVATGWA
GSAYGGIAIPRVGMEVLVTFLENDPDQPLITGCLFHKENVVPYDLPAHKTRSTFKTLSSP
GGQGYNEFRIEDKKGAEQIYLHAQRDWDENIEHDQKIRVGNERHDTVEANTFSEFKAEEH
RITHLDRRTEARADDHLTVGATQHVKVGTAQFVEAGREIHYYAGDKVVLEGGMEFTAKAG
GSFIKIDAGGVTISGAQVRTNSGGAPGAGTGIGILAPLVPGLAAAGRAGHLMRTAKANPT
WLELNLHYDNLEPVPGASYRVEFADGSTREGVLDDDGFARLEDVPKGPAKVYYGEDPRPF
SRESVAVVQSTDEKVNEDLRKLGLDPDQVDLQALVEKAAGRLA
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgctggacgcaaatgctacccatatctccctcacgctcgaaggcgtttccacagacctg
caagtcctcagcttcatcggtcgcgaagcccttaaccagccctaccgtttcgacgtcgag
ctggtcagcagccgtcccaatctgaatctcaaggagctactgcacacgcgcgcccacctg
accttcggtgccacgggcaaaggcatcatccatggcctggtctacggcatcgagcagggc
gattcaggcaagacactgacccgctacagcatcacgctggtgccgcaacttgcctacttg
cggcacaaccatgaccagcagattttccagcaactgacggtgccagagatcattgctcag
gtcctggaagcacggggcattctggccgatgcctacagttttcaactcggtgcgacctac
cccgagcgcgtttactgcgtgcagtacgacgaatcggacctgcatttcatccagcgtctg
tgcgaagaagaaggtattcacttccactttcagcactctgccagtggccacaaactggtg
tttggcgacgaccagacggtgttccgcaaactcgtccccgtgagctatcagcaggattcc
ggcatggcggccgagaaaccggtgatcaagcgtttcaacctgcgactggaaacccgcact
actcgcgtcagccgccgcgattacgactttgaaaagccgggcctcctgcctgaaagcacc
gccaagagccctttcttgcctgaccttgaagactacgattaccccggccgtttcaccgac
cgcagacggggcaagcaactgacgacccgcgcccttgaacgccatcgcagcgattaccaa
cttgccgaaggccaaggcgacgagccaaccctggtcaccggccatttcatgaccctgagc
gaacacccgcgagccgaatggaacgacctgtggctgttgctggaggtcatccacgaaggc
aaacagccgcaagtgctgggcgaaaacatcaccagcgacgtcaccgacaacaaggacgac
ttccatcagggctaccgcaatcgcttcctcgcaaccccgtgggatgcccattaccgcccg
ccattggcccacctcaaacccctgaccatcggtagccagaccgctatcgtcaccgggcca
aaaggcgaagagattcactgtgatgaatacggtcgggtcaaggtgcagtttttctgggac
cgcgagggccggggtaatgataaaaccacctgctggctgcgcgtcgccaccggttgggcg
ggcagcgcttatggcggcattgccatcccgcgagtcggcatggaagtgctggtcaccttt
ctcgaaaacgaccctgaccaaccgctgatcaccggctgcctgttccacaaggaaaatgtc
gttccttacgacctgccagcccacaagacccgcagcaccttcaagaccctcagctcgccg
ggcggccagggctataacgagtttcgcatcgaagacaagaaaggtgcagaacagatctac
ctgcatgcccagcgcgactgggatgaaaacatcgaacacgaccagaagatccgcgtgggc
aacgagcggcacgacaccgttgaagccaatactttcagcgagttcaaggccgaagaacac
cgcatcacccatctggaccgcaggaccgaagcccgtgccgacgaccacctgaccgttggc
gcgacccagcatgtaaaagtcggaacggcgcagtttgttgaggccgggagggagattcac
tactacgcgggcgacaaggtggtgctggaaggcggcatggagttcaccgccaaggctggc
gggagttttatcaagatcgatgctggcggcgtgaccatcagcggggcgcaggtgaggacc
aactcgggtggtgcgccgggggccgggacggggatcgggattcttgcgccgctggttcca
ggccttgcggctgccggcagggccggtcacttgatgaggactgccaaggccaacccgacc
tggctggaactgaacctgcattacgacaaccttgagcccgtgcccggcgcctcctatcgc
gttgagtttgccgatggctcgacccgcgaaggcgtactggacgacgatggttttgcccgg
ctggaggatgtccccaaaggccctgccaaggtgtattacggtgaagatccccgaccgttc
agtcgcgaaagcgtagcggtcgttcagagcacggatgaaaaggtgaacgaagatttacgc
aaactcggcctggacccggatcaggttgatttacaggcattggtggaaaaagccgcaggg
aggctggcatga

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