Pseudomonas cichorii: PCH70_42800
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Entry
PCH70_42800 CDS
T03002
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pci03019
]
PCH70_42800
Messenger RNA biogenesis [BR:
pci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PCH70_42800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
AAA_16
AAA_22
AAA_29
RsgA_GTPase
ABC_tran
FtsK_SpoIIIE
dNK
Motif
Other DBs
NCBI-ProteinID:
AHF69433
LinkDB
All DBs
Position
4999614..5000471
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AA seq
285 aa
AA seq
DB search
MRLIVVSGRSGSGKSTALNVLEDNGFYCVDNVPAGLLPELAERALMNSELAEPLLAVSID
ARNLPSHLTRFPQILAELRALNIQCDVLYLDADEATLLKRFSETRRRHPLSTANRSLAEA
IHDETTLLGPIIDLADLKINTTHLNLYQLRDTLKLRLLNRPEAGTAFLIESFGFKRGMPV
DADVVFDVRCLPNPYWKPELRDHSGLDAPVVEYLAAQPDVEEMFQDIFSYLNKWLPRFAA
SNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcgtcgtgagtggtcgttcgggttctggcaagagcacagcgctgaatgtg
ctggaagacaacggtttctattgcgtagacaacgttcctgccggcctccttccggaactg
gcagagcgtgcgctgatgaacagcgagctggcagagcctctgctggcagtgtccatcgat
gcacgcaatctcccgagccacctgacgcgtttcccgcagatcctcgccgaacttcgtgca
ctcaatatccagtgcgacgtgctctacctggacgccgacgaagcgacgctgctcaaacgc
ttctccgaaacccgtcgtcgtcatccgctgagcacggcgaatcgttcgctggcagaagcc
atacacgacgaaacgactctgctggggccaatcatcgatctggcagatctcaagatcaac
accacgcacctgaacctctatcaactacgcgacaccctcaagcttcgcctgctgaacagg
cctgaagccggtaccgccttcctgatcgagtcgttcggtttcaagcgcggcatgcctgtg
gacgccgacgtcgtattcgatgtgcgctgcctgcccaatccgtactggaagcctgaactg
cgcgatcattcgggcctcgatgctcccgttgtcgaatacctggcagcccagcctgatgtc
gaagagatgttccaggacattttttcctacctcaacaaatggctgcctcgctttgctgcc
agcaaccgctcgtacgtcaccattgccattggctgcacaggcgggcatcaccgctccgtc
tacctgacagagcgcctgggtcaggtcctgcaacaatcactcaagaacgttcaggtccgc
caccgcgacctcagctga
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