Pseudomonas cichorii: PCH70_43660
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Entry
PCH70_43660 CDS
T03002
Name
(GenBank) type 4 fimbrial biogenesis protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pci02044
]
PCH70_43660
02035 Bacterial motility proteins [BR:
pci02035
]
PCH70_43660
Secretion system [BR:
pci02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PCH70_43660
Bacterial motility proteins [BR:
pci02035
]
Pilus system
Pilus assembly proteins
PCH70_43660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AHF69519
LinkDB
All DBs
Position
complement(5111223..5114354)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAALYLSAPVYAFTPSQVPLLSASAVTPNVMLQVDNSGSMDTIIFASGFNASASWPVIYE
SQSNCFLFICGSYSRGAQINTGDSDYVTVGSLSTDGCNSGYGFYRNASSVTCISLPDPAR
SGNTRYPGAYLSYLVSEVNAGRSVANIPTESRLTSAISVALGLVDANRSLRIGLATYNPP
NNNDRGPGGNIKQAVSDLSPVPATTYQAGVTQATADTNYRNLRAAISALTAEANTPLAET
YYQVTRYFRGLTPFPAYTNSPTTFTSPIQYRCQKNYGVVLTDGLPTYDKNFPTNDVDDPN
RYLPNWDRVNNDGPNTNEANEGDTLYLDDIAKFAYDIDMRKDSTSPGGDLTGRSWDNAGF
PRQNLSTYTIGFTLDNQMLIDAADDNHGRAKYFQANDSAGLNTALNLALTDIYAKAGSGG
GGVSSSSTLQAGTQFYQTLYDPTDWHGTVRAFNLNATTGALSAPVWTTDSTIVSSSTAPV
FESWNTGTTGTASARITLDFLNFSPAQQLAFTTTLPTGVTGPEVIAWAKGTANAKLRTRT
RLLGDIINSTLGAGLPTEKTAADLVGDTSYTTYLANKNSNMTYSLLANANDGFFNVINAS
NGVRRYAYMPSTSLASLATISSTNYGSGVHKFTVDGQIAVFDTQLSAGSAWRTVAFSGLG
AGGKAFFAIKLFEGTSNTPEAMWEVKAPDTSDTNNRFNNLGYTYSKPDVARMADGTGIMV
VGNGYGSFTGRASLFVLNANTGAFIAEIQTPLVVSGETDNGLSSVKLRVNSQNVVQAAYA
GDLKGRMWKFDMSGAAASSWRVAFNGSPLFTAPRGANQPITVQPLLIDHPLNGKLVYFGT
GKFSETTDKQTSALQDFYAIWDGDAGSGNIVEANLQAQAVNGSVTGNGNTYFTSTTNDVD
WATKKGWYMPLATAAPYLGERIIYPAQTSRGRIIFTTASVNSTDPCESTGTGRLFELDAA
TGSMLNYQVLDTNGDNDITAADTLVAGLGIGTGIPVVASIVAGTNGNNDNKYLIDSSGGT
PVKLLEKGGSANVFQRIMWRQIQ
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcgctttatctgtctgcgccggtttatgcgttcacaccttcacaagtaccgttg
ctgagtgcttctgccgttacgcccaatgtcatgttgcaggtggataactccggcagtatg
gatacgatcatttttgcctcggggttcaatgcgtcggcgtcgtggcctgttatttatgag
tctcaatccaattgttttttatttatttgtggttcttattcaaggggggcacaaatcaat
acgggggattccgattatgtaactgtgggtagcctgagtactgatgggtgtaacagtggt
tatggtttttacaggaatgcttcttcggtgacctgtatctcattgcctgaccctgcaagg
tccggtaatacacgttatcccggtgcttatctgtcttatctggtttccgaagtcaatgct
ggccgcagtgtggcgaatataccgaccgaaagccgtttgacctctgccatttctgttgca
ttgggactggtcgatgccaaccggtcattgcgtatcgggttggcgacttataatcccccc
aacaataacgacagaggaccgggtggtaatatcaagcaggcggtgagtgacttatcgcct
gttccggccacgacttatcaggcaggcgttactcaggcgactgccgatacaaactacagg
aatctgcgagctgcgatttcggcgttgactgcagaggccaacacgccccttgctgaaacc
tattatcaggtgactcgttattttcgcgggcttactccttttccggcatacaccaattcc
ccgacaacctttacaagccccattcaatatcgttgccagaagaactacggtgttgtattg
acggatggtctacctacgtacgacaagaactttcccaccaatgatgtagatgatcccaat
cgttacttgcccaattgggatcgtgtcaacaatgatggcccgaataccaatgaggccaat
gaaggggatacgctctatctggacgatattgccaagttcgcctatgacattgacatgcgc
aaagactccacttccccgggcggcgatctgacgggtagaagttgggacaatgccggtttc
ccgaggcagaacctgagcacatacacgatcggcttcacgctcgataaccagatgcttatc
gatgccgcagacgataatcatggacgtgccaaatacttccaggccaacgacagtgccggt
ctgaataccgcattgaaccttgcgcttactgacatctacgccaaggcaggctccggcggt
ggtggcgtatcaagttcatcgaccctccaggccggaacacagttttaccagacgctctac
gacccgaccgactggcacggtaccgtcagggccttcaatctgaatgccacgaccggagcc
ttgagtgctccggtctggacgacggacagcacgattgtcagcagttctactgcacctgtt
ttcgagtcatggaacacggggactacagggactgcatccgcgagaattacactggacttc
ctcaatttcagtccggcacagcagcttgcattcacgaccacactgcctacaggcgtgacg
gggccagaggtgattgcctgggccaagggcactgcgaacgccaagttgcgcacgcgcacc
aggctgctcggcgatatcatcaactctacgctgggcgcggggttgcccactgaaaagaca
gctgccgatctggttggcgataccagttacaccacctacctggccaacaagaacagcaac
atgacctacagccttctggccaatgctaacgatggcttcttcaatgtcatcaatgctagt
aacggggtgcggcgatacgcctatatgccttccacgtcgctggcgtctctggcgaccatc
tcttcaaccaactacggttccggggtgcacaagttcacggttgatgggcagattgcggtt
ttcgatactcaattatccgctggctcggcatggcgtacagtcgctttctccggtctgggg
gcggggggcaaggcgttctttgcgatcaaactgtttgaagggaccagcaatacccccgag
gcaatgtgggaggtcaaggcaccggacacctccgacaccaataacaggttcaataacctg
ggttatacctactccaagcctgatgtagcgcgtatggccgacgggaccggcatcatggtg
gtgggcaatggctatggcagttttacaggccgggcgtcgctgttcgtgctgaatgccaat
acaggcgcattcattgcggaaatccagacaccgcttgtcgtcagtggtgagactgataac
ggcctgtcctcggtcaagctgcgggtcaattcgcagaacgtcgttcaggctgcttatgcc
ggggacctcaaggggcgtatgtggaagttcgacatgagtggtgcggcggcttccagctgg
agggtcgctttcaatggttcgccgttgttcactgcgccaaggggagccaaccagccgatt
actgtacagccgctgttaatcgatcacccgctcaacggcaagcttgtgtatttcggtacc
ggtaaattcagtgaaaccactgacaagcagaccagcgccttgcaggacttttacgccatc
tgggatggtgacgccgggtcaggcaatattgttgaagccaacctgcaggcccaggcggtc
aatggttcggtgaccggcaatggcaatacttacttcacttccactaccaacgatgtggac
tgggccaccaagaagggctggtacatgccactggcaaccgctgcgccttacttgggcgaa
aggattatctatcctgcacagacctctcgtggccgtatcattttcaccacggcctcggtg
aactccaccgacccgtgtgaaagtaccggtaccgggcgtctgttcgagctggatgccgcc
accggcagcatgctcaattatcaggtgctcgataccaacggcgacaatgacattaccgct
gccgacaccctcgttgccggccttgggatcggtacggggattccggtggtcgcttccatc
gtggcaggcaccaacggcaacaacgacaacaaatacctgatcgactccagtggcggaacg
ccagtcaagctgctggaaaagggcgggagtgccaacgtcttccagcgcatcatgtggcga
caaatccagtag
DBGET
integrated database retrieval system
