Pseudomonas cichorii: PCH70_44570
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Entry
PCH70_44570 CDS
T03002
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pci03016
]
PCH70_44570
Enzymes [BR:
pci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PCH70_44570
Transfer RNA biogenesis [BR:
pci03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PCH70_44570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AHF69610
LinkDB
All DBs
Position
5211334..5212662
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDTARI
TRLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLAEVIHLAENGVREITLLGQNVNGYRGTTHDGRVADLADLIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRVLAAMKRNHTTLEYKSKLRKLKAAVPGI
SISSDFIVGFPGETEKDFENTMKLIQDVGFDFSFSFIYSPRPGTPAADLKDDTPEALKKE
RLAALQHRLNQQGFEISRQMVGSTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPKLI
GQFADVHIDDAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttatatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacatcaagccctggaagtcaccgctcgcgcggaagat
gccgacgtgatcctgctcaatacctgctcgattcgcgagcgagcccaggatcgggtctac
tcccaactgggtcgctggcgtgaactgaagctggccaacccagagatggtcatcgctgtc
ggtggttgcgtcgccagtcaggaaggcgcggccattcgtgatcgcgctccttacgtggac
gtggtcttcggcccgcaaaccctgcaccgcctgccggaaatgatcgacaccgcacgcatc
acccgcctgcctcaggtggatgtgtcgttcccggaaatcgagaaattcgaccacctgccc
gagccgcgcatcgacgggccaagtgcctatgtgtcggtgatggaaggttgcagcaagtac
tgcacgttctgcgtcgtgccttatacccgtggtgaagaagtcagccgtccgttcgatgac
gtactggcagaagtcattcacctggccgaaaacggcgtgcgtgaaatcacgctgctgggc
cagaacgtcaacggctatcgcggcacgacccatgacggccgcgtcgccgatctggccgac
ctgatccgcgtggttgcggcagtcgatggtatcgaccgcatccgctacaccacttcacac
cctctggagttttccgacagcctgatccaggcccacgccgaagtgccggaactggtcaaa
cacctgcacctgccggtgcaatcaggctccgaccgtgtcctggcggccatgaagcgcaat
cacaccacgctggaatacaaatccaagctgcgcaaactcaaggctgccgtgccgggtatc
agcatcagttcggacttcatcgtcggctttccgggcgaaaccgagaaagacttcgagaac
accatgaagctgatccaggacgtgggtttcgatttttcgttctcgttcatctacagcccg
cgccctggtacgccagccgccgatctgaaagacgacaccccggaagccctcaaaaaggaa
cgcctggcggccctgcaacatcgtctcaaccagcagggtttcgagatcagccgacaaatg
gtcggcagcacccagcgcatcctggtgaccgattactcgaaaaaggaccccggcgagttg
caagggcgcaccgaaaacaaccggatcgtcaactttcgctgcgacaaccccaagctgatc
gggcaattcgccgatgtgcacattgacgatgcacagccgcattcgctgcgtggttcgctg
ttgcagtag
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