Pseudomonas cichorii: PCH70_45120
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Entry
PCH70_45120 CDS
T03002
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PCH70_45120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_45120
Enzymes [BR:
pci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PCH70_45120
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PCH70_45120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
FH2
Rota_NSP3
Motif
Other DBs
NCBI-ProteinID:
AHF69665
LinkDB
All DBs
Position
5272212..5272454
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AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLTDLQTLVERLENGELSLEDSLTAFEQGVRLTRDCQNALAQAEQKVQ
VLLERDGELAEEPFEADQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaaagctgcactggatttcgaacaatcccttaccgatctgcaaacgctg
gttgagcgtctggagaatggtgagctgtcgttggaagactcattgaccgctttcgagcaa
ggcgtgcgcctcacacgtgactgtcagaatgccctggcccaggccgagcagaaggtgcag
gtattgctggagcgcgacggcgaactggccgaagagccctttgaagcggatcaacccgaa
tga
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