Pseudomonas cichorii: PCH70_47530
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Entry
PCH70_47530 CDS
T03002
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03030
DNA replication
pci03430
Mismatch repair
pci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCH70_47530
03430 Mismatch repair
PCH70_47530
03440 Homologous recombination
PCH70_47530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pci03032
]
PCH70_47530
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_47530
Enzymes [BR:
pci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCH70_47530
DNA replication proteins [BR:
pci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCH70_47530
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCH70_47530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHF69906
LinkDB
All DBs
Position
5500953..5501666
Genome browser
AA seq
237 aa
AA seq
DB search
MNLFEWLRPRPKKTPLEQQHLQRLAELPAFAPLNEESLRKQRWVVLDLETSGLNMNRDQV
LSIGAVVIEDGAIDLGQQFERTILRVDHKVSPAVLIHGLAPSTIAAGSEPVEAFLDFLEF
AGSSPMLAFHAPFDQHMLSRALKDSLDYRLQHPFFDVADIAPMLCPDASLRQAGLDDWTN
FFGLHAEERHHASADALVTAELALILFSHARRQGIDSPARLEESLGQWRRRKQNHSF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgttcgagtggctacgaccacgaccgaaaaagacgccgctggagcagcagcac
ctgcagcgtctggcagagctgccagccttcgcgccgctgaacgaagagtccttgcgcaaa
cagcgctgggtcgtgctcgacctggaaaccagcggcctgaacatgaaccgcgatcaggtc
ctgtccatcggtgccgtggtgatagaagacggtgccatcgatctgggccagcagttcgag
cgcaccattcttcgtgtcgatcacaaggtcagcccggcagtgctgatccacggtctggcg
cccagcaccatcgccgcgggtagcgagccggtggaggcttttctggacttcctggagttc
gcaggctcaagcccgatgctggcgttccatgcacctttcgaccagcacatgctgtcccgc
gccctgaaggacagcctggattatcgcttgcagcatccgttcttcgatgtcgcagatatc
gccccgatgctctgccccgacgccagtttgcgtcaggccggcctggacgactggacgaac
tttttcgggctgcacgccgaagagcgccatcatgccagcgccgacgcgctggtcacggct
gaactggccttgatcctgttcagccatgcacgccgccagggcatcgacagccccgcccgt
ctggaggaatccctgggtcaatggcgcaggcgcaagcagaaccattcgttttaa
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