Pseudomonas cichorii: PCH70_47870
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Entry
PCH70_47870 CDS
T03002
Name
(GenBank) putative membrane protein
Organism
pci
Pseudomonas cichorii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
DUF4347
Big_5
Motif
Other DBs
NCBI-ProteinID:
AHF69940
LinkDB
All DBs
Position
complement(5542369..5549550)
Genome browser
AA seq
2393 aa
AA seq
DB search
MLFDGAVAATVADAAQSDSQATAEAAKTTDQASAKDSSSDSHAQSAATADITTTSTTVTG
STVVFVDSRVKDADSLLTGVAPGAQVVMLDATKDGLQQIADYLESHQGVSSVQIIAHGNS
GDLWLGNSYLSADNIAQRSALLAEIGNDMVAGGDILIYACNTAEGELGLSFVDSLAQLTG
RDIAASTNRTGVGGDWTLEIATGSIESIGALSQQAMDSYQWGLATITVTSSSSTGAGTLR
AALASAQNGDIVTFSSSMTVALDAQLVVNRNITIDGDLDNNGVADVTLDGQNRTSVIRVT
SGTTATFDGLIITRGVASTSGANSGATVSAADAVGGGINNAGNLTLRNVTVTANSAAGGG
GGGGVLTPTVGGGGGGGGGIGGQNGATGGAAGSYFPTSPSANTGGNGAGFNTIYMGGRGG
NASGGGAGGIGVSGYTNGGAGGTATSGGRTIGGGGGGSGFDATGGRGGSAVGGIYNASTG
TLAIIGTSTISSNIGAGGGGGGGGTIGGNGGRGIGAIWNRGTLNITAGNNSSLSGNVGIS
GSGGQATSGGTNGTSPTGVNNIFNDGGGLNITYSADISAPTISSIVIANPSLGSGGSSAV
TFTFSEPVFGLDISEIVVPNGTLTNLTTTNNITWTATLTASSNVSDSSNAITLAGSAVQD
SAGNIGTGTATSNNYVVSDSVAPTATVVVSDTTLIAGETSLVTITFSEAVTGFNNADLSV
ANGTLTAVSSSDGGVTWTATLTPFNNLTSATNLISLNMSSVQDLSANSGTGTVSSNNYAI
DTSRPTATIVVADPSLTIGETSTVTITFSEAVSGFSNADLTVANGTLSAVSTSNNIVWTA
TLTPTNNITDTSNLITLDNTGVTDAAGNTGLATTISNNYLVDTIRPTSSIQVADANITAG
ETSLVTITFSEAVSGFTNADLTVPNGTLTNVSSSDGGITWTATFTPTNNVSDTTNLITLD
NTGVTDMAGNAGVGSTNSGNFTINTVRPTGTIIISDSSLSIGETPTVTITFSEAVSGFSN
ADLIVANGTLSPVSSSDGGITWTATFTPAANVTDLTNVITLDMSGVANSSGNAGLGTLTS
NNYAIDTLRPTATIVVANNNLSIGETSLVTITFSEAVSGFTNADLTVSNGSLSAVSSSDG
GITWTGILTPVAGVTNASNVITLTNTGVFDIAGNVGVGTTNSSNYAIDTVRPTSAITMAD
SNLSVGETSLVTITFSEAVTGFTNGDLIVPNGTLSTLTSSDGGITWTATFTPNINIADTT
NLIILDNSGVTDLAGNVGSGITNSPNFTIDTMQPTATIVVADSALRVGETSLVTITFSEA
VNGFTNADLTVSNGTLSPVSSSDGGITWTATFTPNQGLSDATNLITLDNTGFTNVSGNSG
SGTTISNNYAIDTVRPTSAIVVADNALAIGENSLVTITFSEAVTGFTNADLTVSNGTLSA
VSSSDGGVTWTATLTPTANITSASNVITLDNTGVTDQAGNTGTGITTSSNYAIDSARPTA
SIVVADSTLIAGETSLVTITFSEAVSGFTNGDLSVANGTLSTVSSSDGGITWTATFTPTN
NIVDSTNLITLDNTGVTDLAGNTGTGTTNSNNYAIDTARPTATIVVADNALRVGETSLVT
ITFSEAVSGFTNADLTIANGTLSAVSSSDGGITWTATLTPTASVTDTTNLITLDNTGVAN
ASGNIGSGTTDSNNYAIDTVRPTSTIVVADNALAIGETSLVTITFSEAVTGFTNADLTVS
NGTLSAVSSSDGGVTWTATLTPTANITSASNVITLDNTGVTDQAGNAGTGLTTSGNYAVD
SERPTASIVVADSSLAAGETSLVTITFSEAVTGFTNADLTVPNGTLSAVSSSDGGITWTA
TFTPTANSSDTSNVISLNSAGVTDLAGNAGTGIVNSGNFTIDTRQPTATIVVADSALVIG
ESSLVTITFSEAVSGFTNADLTVANGTLSAVSSSDGGITWTATLTPAANVTDTTNLITLD
NTGFANASGNIGSGVTSSNNYTIDTARPTATIVVANSTLGIGQTSPVTITFSEAVTNFDL
SDLSVANGTLSNLVSSDGGITWTAILTPTANITDATNFIVMDSSNVTDLSGNAGSGVQNS
ANYAIDGQVPTISSIVVANPNLTTGQTTQVTFTFSERVSNFDLSDLSVANGTLSNLASND
GGLTWTATLTPTANTQAPSNFITLDSSNVTDLAGNTGIGITNSSSYAVTTLSQGGDPQFR
ISDSVPLISQPNLPLQPTLFGPPTGNLGSPLSFAPLFEVRTTGDGLPPLGNIFISNGALA
PSFIAQVFSSSELGGSTGATGGFLGFSSGEGGVFGSSTLSTLFSRESSTDTSAQSTFDSG
SSRGLSDSSQGIRGSFGALTLEQQLQLLKDGEQKQLHELAWALGKAGISEVQA
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgatggcgcagtggctgccaccgttgccgatgctgcgcagtcggacagccag
gcgactgccgaggctgccaagactaccgatcaggccagtgccaaagacagcagcagcgat
agccatgcgcaatcggctgcgacggctgatatcacgaccacctcaacgaccgtaacaggc
agcaccgtggtcttcgtcgactcgcgggtcaaggacgccgacagcctgctcacaggcgtt
gcgcctggcgcgcaggtggtcatgcttgacgctaccaaagacggcctgcaacagatcgcc
gactatctggagtcccatcagggcgtgagttcggtgcagatcatcgcccacggcaactcg
ggtgatctgtggctgggcaacagctatctgtcggccgacaacattgctcaacgcagtgcc
ttgctggccgagatcggcaatgacatggtcgcgggcggcgatatcctgatttacgcctgt
aataccgccgaaggcgagctgggtctgagcttcgtcgattcgctcgcacagctcactggt
cgcgacattgctgcatcgaccaaccgcaccggcgtgggcggcgactggacgctggaaatc
gcgaccggcagcatcgaaagcatcggtgctctgtcccagcaggcgatggactcttaccag
tgggggcttgcgaccatcaccgtaacctccagcagcagtaccggcgcaggaaccttgcgt
gcagcgctggccagtgcccagaacggcgatatcgtgaccttctccagcagcatgacagtc
gcgcttgacgcccagttggtggtcaacagaaacatcaccatcgatggcgacctggataac
aacggcgtggcggatgtcacgctggatggccagaacaggaccagtgtgatccgggtgacc
tccggtacgacggccacctttgacggtctgatcattacgcgcggcgttgccagcacttcg
ggtgccaatagtggtgcaacggtttcggcggctgacgctgtgggcggcggtatcaataac
gccggtaacctcacgttgcgcaatgtcaccgtgacagccaactctgccgcaggcggtggt
ggtggcggtggcgtgttgaccccgaccgtcggtggtggtggcggtggcggtggtggtatt
ggtggtcagaatggtgctaccggtggcgctgccgggagctatttccctacatctccctca
gccaacaccggcggtaacggtgcgggtttcaacacgatttacatgggggggcgtggtggt
aatgcgagcggtggtggtgctggtggtattggtgtctctggttataccaatggcggcgcg
ggcggcacggcgacttccggtgggcggactatcggcggtggcggtggcggttcgggcttt
gatgccactggcggccgaggcggctcggcggtaggcggtatctataacgcctctactggc
accttggcgatcatcggcacctcaaccatcagcagcaacatcggtgcaggcggcggcggt
ggtggtggcggtacgatcggcgggaacggcggccggggtatcggtgccatctggaacagg
ggcacgctcaatatcacggcaggcaacaactcgtccctgagtggcaacgtaggtatcagc
gggtcgggtggtcaggcaaccagcggtggtacaaacggtacctcgccaacgggggtcaat
aacatcttcaacgatggtggagggttgaatatcacctacagtgctgacatttcggcaccc
acaatctccagcatcgtgattgccaacccgtctttggggtcaggtggttcgtctgccgtg
acgttcaccttcagtgagccggtgttcggtctggatatttccgagattgtcgttcccaac
ggcaccctgaccaacctcacgaccaccaacaacatcacatggactgccacgctgacggca
tccagcaatgtctcggactcgagcaacgccattaccctggccggttcggccgtgcaggac
tcggcgggcaatatcgggaccgggaccgcgacgtccaacaactatgtggtcagtgactcc
gtcgctccgaccgcaaccgtcgttgtgtcggacaccacgttgatcgcgggcgaaacttcg
ctggtcaccatcaccttcagcgaagcggtaacgggtttcaacaatgcggatttgtcggtt
gccaacggtaccctgaccgcagtaagcagcagtgacggtggcgttacctggaccgcaacc
ctgacgccgttcaacaacctgaccagtgctaccaacctgatcagtctgaacatgtccagt
gtgcaggacttgtcagccaactcaggcactggaacggtttcatcgaacaactatgcaatc
gatacgtcgcgcccgaccgccactatcgtcgttgcggacccttcactgactatcggtgaa
acgtcgacggtgacgattaccttcagtgaagcggtcagcggttttagcaacgctgacctg
actgtcgccaacggtaccctgagtgcagtaagcaccagcaacaacattgtctggaccgcc
accctcacgccgaccaacaacatcactgataccagcaacctgattaccctggacaatacc
ggtgtcacggatgccgcaggtaataccgggcttgccacgaccatttccaataactacctc
gtcgatactattcgcccgacctccagcattcaggttgccgacgccaacattaccgccggt
gaaacctcgctggtgaccatcaccttcagcgaagcggtgagcggttttaccaatgccgac
ctgaccgtgcccaacggtaccttgactaacgtcagcagcagcgatggcggtattacctgg
accgcgaccttcacgccgaccaacaacgtatccgacaccaccaacctgatcaccctggat
aacactggcgtgacagatatggccggcaacgccggggtcggtagcaccaactcgggcaat
ttcaccatcaacactgtgcgtccgaccgggacgatcattatctccgacagttctttgtcg
atcggcgaaaccccaacggtgaccatcaccttcagcgaagcggtgagcggcttcagcaat
gctgacctgattgtggctaatggcacattgagcccggtcagtagcagtgatggcggtatc
acctggaccgcgaccttcacgccagccgcgaacgtgaccgatctcaccaacgtgatcacg
ctggatatgtccggtgtcgcgaactcttctggcaacgcgggcctcggtaccctcacctcg
aacaattacgccatcgataccttgcgcccgaccgcgaccattgtggttgccaataacaac
ctgtccatcggcgaaacctcgttggtcaccattactttcagtgaagcggtgagcggcttc
accaacgccgacctgaccgtgagcaacggttcgctgagtgcggtcagcagcagcgatggc
ggtatcacctggaccgggatactgactccggtagcaggcgtcaccaatgccagcaacgtc
atcactctgaccaataccggggtgttcgacatcgctggcaacgtgggcgttggtaccacc
aattcgagcaactacgcgatcgacactgtgcgcccgacttcggccattacaatggccgac
agcaacctctcggtcggcgaaacctcgttggtcactattactttcagcgaagcggtgacc
ggcttcaccaatggcgacctgatcgtacctaacggcaccttgagcaccctcaccagcagc
gatggcggcattacctggaccgcgaccttcacaccgaatatcaatatcgctgacaccacc
aacctgatcatcctggataactcaggcgtgacagacctggccggcaacgtcgggagcggt
ataaccaactcgcccaacttcaccatcgataccatgcagcccacggcaaccatcgtggtc
gcggacagtgcgttgagagtgggcgaaacttcactggtcaccatcaccttcagcgaagcg
gtgaacggttttaccaacgctgatctgacggtgagcaatggcaccttgagcccggtcagc
agcagtgatggcggtatcacctggacggcgacctttacgccgaaccaggggctgagcgat
gccaccaacctcatcacgctggataacactgggttcaccaacgtatccggtaactcgggt
tccggtaccacaatctcgaacaactacgccatcgacaccgtgcgtccgacctcagccatc
gtggttgccgacaacgccctggccattggtgaaaactcgttggtgaccatcaccttcagc
gaggctgtgaccggtttcaccaacgccgacctgaccgtgtccaatggcaccttgagcgcg
gtcagcagcagcgacggcggtgtgacctggactgcaaccctgacgcctaccgccaacatc
accagtgccagcaatgtcatcactctggataacacgggtgtgaccgatcaggcaggcaat
acgggcaccggcatcacgacatcgagcaactatgccatcgactctgcgcgtccgaccgcg
agtatcgttgtggctgacagcacgctgatcgctggcgaaacttcgctggtgaccatcacc
ttcagcgaagcggtgagtggtttcaccaatggcgacctgagcgtggccaacggtaccttg
agtaccgtcagcagtagcgatggcggtatcacctggacagcgactttcacgccgaccaac
aacattgtcgatagcaccaacctgatcaccctggataacaccggcgtgactgatctggct
ggcaacaccgggaccggcacgaccaactccaacaactacgccatcgacactgcgcgcccg
actgcaaccatcgtggtagcggacaacgcgctgcgagtcggtgaaacttcgttggtgacc
attaccttcagcgaagcggtgagcggtttcaccaatgctgacctgaccatagccaacggc
accttgagcgccgtcagcagcagcgatggcggtatcacctggacggcaaccctgacgccg
accgccagcgtgaccgacaccaccaacctgatcaccctggataacacgggcgtcgccaat
gcttccggcaacatcggcagcggcacgaccgactccaacaactacgccatcgacaccgtg
cgtccgacctcaaccatcgtggttgccgacaacgccctggccattggtgaaacctcgttg
gtgaccatcaccttcagcgaggctgtgaccggtttcaccaacgccgacctgaccgtgtcc
aatggcaccttgagcgcggtcagcagcagcgacggcggtgtgacctggactgcaaccctg
acgcctaccgccaacatcaccagtgccagcaatgtcatcactctggataacacgggtgtg
accgatcaggcaggcaacgcgggtaccggcctcacgacttcgggcaattatgctgtcgac
tccgagcgtcccacagcgagtatcgttgtggcagacagctctcttgcagcaggcgaaacc
tcgctggtgaccatcaccttcagcgaagcggtcaccggtttcaccaacgccgatctgacg
gttcccaatggcaccttgagcgcggtgagcagcagcgatggcggtatcacctggacggcg
acctttacaccgactgccaatagctctgacaccagtaacgtgatcagcctgaacagcgcg
ggtgtgacggacctggctggcaacgccgggacaggtatcgtcaattcgggcaacttcacc
atcgacacccggcagccgaccgcaaccatcgtggtagcagacagcgcactggttatcggt
gaaagctccctggtgactatcaccttcagcgaagctgtaagtggtttcaccaatgccgac
ctgacagttgccaatggcaccttgagcgcggtcagcagcagcgatggcggtatcacctgg
acggcaaccctgacgccagccgcgaacgtgaccgacaccaccaacctgatcacgctggat
aacacgggctttgccaatgcttccggcaacatcggcagcggcgttaccagctccaacaac
tacacgattgatacggcgcgcccgaccgcgaccattgtggtagccaacagcacactgggg
atcggtcaaacctcgccagtgaccatcactttcagtgaggcggtcactaacttcgatctg
tcggacctcagcgtcgccaacggcactctgtcgaacctggtcagcagcgatggcggcatt
acctggaccgcaatcctgacgccaacggcgaatatcacggatgcgaccaacttcatcgtc
atggacagcagtaatgtcacggacctgtcgggtaacgcgggttctggcgtccagaactcc
gccaattacgccattgacggtcaggttccaaccatttcgagcattgtggttgccaacccg
aacctgaccaccgggcagaccactcaggtgacattcacgttcagtgagcgtgtcagtaac
ttcgatctttcggacctcagcgtcgccaacggcaccctgtccaatctggccagcaatgat
ggtggcctgacctggacagcgactctgaccccgacagccaacacgcaggctccgagcaac
ttcatcacgctcgacagcagtaatgtgacggacctggcaggcaataccggtatcggtatc
accaactccagcagctacgcagtcaccacgctttctcaaggtggcgatccgcagttccgc
attagcgattcggtccctctgatcagccagccaaacctgccattgcagccgacgctcttt
ggcccgccgaccggcaatctcggttcgccgctgagtttcgcgccgttgtttgaagtgcgc
accacaggcgacggtcttccgcctctgggtaacattttcatcagcaatggcgcgttggct
ccaagcttcattgcacaggttttcagctcgagtgagttgggcggcagtacgggggccact
ggcggtttccttggttttagcagcggggaaggtggcgtgttcggcagcagcacattgtcg
acgctgttcagtcgcgagtcctccacggacacctcggcgcaaagtacttttgacagcggt
agcagccgtggcctgagcgattcctcacaaggcattcgcggcagctttggcgcgttgaca
ctggagcaacagttgcaattgctcaaggatggcgagcagaaacagctgcatgaactagca
tgggctttggggaaagccggtatcagtgaagtgcaggcctga
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