Pseudomonas cichorii: PCH70_48260
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Entry
PCH70_48260 CDS
T03002
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pci03021
]
PCH70_48260
Transcription machinery [BR:
pci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCH70_48260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AHF69979
LinkDB
All DBs
Position
complement(5590813..5591607)
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AA seq
264 aa
AA seq
DB search
MHTVNSIPLLTPEQERELAESLYYEQDLDAARQMVLAHLRFVVHIARSYSGYGLAQSDLI
QEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILRNWRIVKVATTKAQRKLFFNL
RSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGQDMAFDPASEADDDSAFQSPAN
YLEDHRYDPARQLEDSDWSDNSTANLHQALDVLDERSRDILYQRWLAEEKATLHDLAQKY
NVSAERIRQLEKSAMNKLKTSIAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgcacacggtgaacagcattcccttgctgacgcctgagcaggagcgtgaactggctgag
agtctctactatgaacaggatctggatgcggctcgtcagatggtcctcgcccacctgcgt
ttcgttgtacacatcgcacgcagctattcgggttacggtctggcacagtccgacctgatc
caggaaggcaacgttggcctgatgaaggctgtaaagcgcttcaacccggaaatgggtgtg
cgtctggtgtcgtttgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgtatcgtcaaggtcgccacgaccaaggcgcagcgcaaactgttcttcaacctg
cgcagccagaaaaagcgtctggcatggctgaacaacgatgaagtgcatcgcgtggccgaa
agccttggtgttgagcctcgtgaagtccgcgagatggaaagccgcctgaccggccaggac
atggcgttcgatccggcgtcggaagccgatgacgacagcgcattccagtcgccggccaac
tacctggaagaccatcgttacgatcctgcgcgtcagttggaagattccgactggagcgac
aactccacggccaatctgcatcaggccctggatgtactggacgagcgtagtcgcgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgatctggcgcagaagtac
aacgtctccgccgagcgtattcgccagctcgagaagagcgcgatgaacaagctcaagacc
tcgatagccgcgtaa
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