Pseudomonas cichorii: PCH70_51250
Help
Entry
PCH70_51250 CDS
T03002
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03420
Nucleotide excision repair
pci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCH70_51250
03430 Mismatch repair
PCH70_51250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_51250
Enzymes [BR:
pci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCH70_51250
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCH70_51250
MMR (mismatch excision repair)
Other MMR factors
PCH70_51250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
RHH_1
Motif
Other DBs
NCBI-ProteinID:
AHF70278
LinkDB
All DBs
Position
5928957..5931140
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQAGGDLFLATMKSIYEAYE
IACQRAGVIDFSELLLRALDLWRDHPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGDLINLYAAFNEHDEARYVVETIESALKTGLSRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHTDISMWEAMRQLVANKGLTGRAAGALNVFMELIENLSAKVMEMPLH
LMTQTVIEQSGLITYHQQEKGEKGQARVENLEELVSAARNFENNEDDEELTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPPTLIQEVRLSNSVSRPFGGTQ
KVSNSSLFTGTGIPETQFTLGQHVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMMG
YAKLVPI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctccttttgaattccctcaacgatgcccagcgtcaggccgta
gctgcctctctgggtcgtcagttggtcctggccggcgctggttccggtaaaacccgtgtg
ctggtgcatcgcatcgcatggctgatgcaggtcgagcaagcctccccgcattcggtcctg
tcggtgacgttcaccaacaaggccgccgccgagatgcgtcatcgcatcgagcaactgatg
ggcatcagcccggcaggcatgtgggtcggcaccttccacgggctggcgcatcgcctgctg
cgtgcacactggcaggaagcggggctggtacagacgttccagattctggacagcgacgac
cagcaacgtctggtcaagcgcgtgatccgcgaactggggctggacgaacagcgctggcct
gcacgtcaggcccagtggttcatcaacggccagaaagacgaaggcctgcgccccaaacat
atccaggccggcggcgatctgttcctggccaccatgaagtcgatctacgaagcctatgaa
atcgcctgccagcgcgccggcgtcatcgacttctccgaactgctgctgcgtgcgctggac
ctgtggcgcgatcatcccggcctgctggcgcactaccagcggcgcttccgccatgtgctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgactgctggcccag
ggcggcgacagcctgatggtggtgggcgatgacgaccagtccatttatggctggcgtggc
gcgaagatcgagaacattcatcagtactcgtcggacttcccggataccgaagtcatccgt
ctggagcagaactaccgctcgacggcaagcattctcaaggctgccaacggcctgatcgtc
aataacagcggtcgcctgggcaaagagctgtggaccgacgtgggcgatggcgatctgatc
aacctgtatgccgccttcaacgaacacgacgaagcgcgctacgtggtcgaaaccatcgaa
agcgccttgaagaccggcctgtcgcgtaacgacattgccattctgtatcgctccaacgcc
cagtcgcgggtgctggaagaagccttgctgcgcgagcgcattccttaccgcatctacggc
ggccagcgattcttcgagcgcgccgagatcaagaacgccatggcgtatctgcgcctgctg
gaaggccgtggcaacgatgccgcgctggagcgggtcatcaacgttcccgcacggggcatt
ggcgagaagacggtcgaggcgattcgcgagcatgcccgccataccgacatctccatgtgg
gaagcgatgcgtcagttggtggccaacaagggcctgaccggccgcgctgccggtgccttg
aacgtgttcatggaacttatcgaaaacctctcggccaaggtcatggaaatgcccttgcac
ctgatgacccagaccgtcatcgagcaatcggggctgatcacttatcaccagcaggaaaaa
ggtgaaaaaggtcaggcacgggtggaaaaccttgaggaactggtcagcgctgcgcgcaac
ttcgagaacaatgaagacgatgaagaactgaccccgctggcagctttcctcggccatgcg
tcgctggaagctggcgacacgcaggctcaggagcacgaagacagcattcagctcatgacc
ctgcacagcgccaagggcctggaattcccttacgtgtttctggtgggcatggaagaaggg
ctgttcccgcacaagatgagcctggaagagcccggccgtctggaagaagaacgccgtctg
gcttacgtcggtatcacccgcgccatgcagcaactggtgatgacttacgccgaaacccgt
cgcctgtatggcagcgaaacctacaacaaggtgtcgcgcttcgttcgcgagattccgccg
acgctgatccaggaagtgcgcctgtccaatagcgtcagtcgtcctttcggtggcacccag
aaagtcagcaacagcagcctgttcacgggcaccggcatccccgaaacccagttcacgctg
ggccagcacgtacagcacgccgtattcggtgaaggcgtgatcctgaatttcgagggctcc
ggcgcccaggccagggtgcaggtcaacttctccgaaggcagcaagtggctgatgatgggc
tatgcgaagctggtcccgatctga
DBGET
integrated database retrieval system
