Psychrobacter cibarius: Q6344_00190
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Entry
Q6344_00190 CDS
T09259
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pcia
Psychrobacter cibarius
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcia03009
]
Q6344_00190
Enzymes [BR:
pcia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Q6344_00190
Ribosome biogenesis [BR:
pcia03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Q6344_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1330
Motif
Other DBs
NCBI-ProteinID:
WLG13815
LinkDB
All DBs
Position
45829..46533
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AA seq
234 aa
AA seq
DB search
MRLDKFLSKATELSRKESKKILHAGEVTVNDQVIKDPGVHVDVVNDDVIWAGEPLSVAAG
SRYILLHKPEGFECTLKVKEHPIVTELIAVPELGSLRIAGRLDVDTTGALLMSDDGKWLH
RVTSPKHEHAKIYELTLADAMDEAAQANAVKEVAEGILLEGDHEETKPAVLEFIDETHAR
LTLEQGKYHQVKRMMGYFGNRVVELHRASVGHITLEGLEKGDSRFLTPEEVAKF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctagataaatttttgagtaaagccactgagctgtcgcgtaaagaatccaaaaaa
attctgcacgctggtgaagtgacggtaaatgatcaggtcatcaaagaccccggtgtccac
gtcgatgtggtcaatgacgacgtgatttgggcaggcgagccattatcggtcgctgcgggc
agtcgttatattctattacataagcctgaaggctttgaatgtacgctgaaagtaaaagag
catccaattgtcactgagctgattgcggtgccagagcttggtagcttgcgcattgcaggt
cgccttgatgttgataccaccggcgcattattaatgagtgatgatggtaaatggttgcac
cgtgtcaccagtcctaaacatgaacatgccaaaatttatgagctgactttagcagatgcg
atggatgaagcggcgcaagccaatgccgtcaaagaagtcgctgaaggcattcttttagaa
ggcgaccacgaagaaacaaaacctgcggttctcgaatttattgatgagacgcatgcacgt
ttgacgcttgagcaaggtaaatatcatcaagtaaaacggatgatgggttactttggtaat
cgagtggttgagctgcatcgcgccagtgtcggtcatattactttggaaggattagagaaa
ggcgacagtcgctttttaacacctgaagaagtcgctaagttctaa
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