Psychrobacter cibarius: Q6344_00440
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Entry
Q6344_00440 CDS
T09259
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcia
Psychrobacter cibarius
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcia03016
]
Q6344_00440 (truB)
Enzymes [BR:
pcia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Q6344_00440 (truB)
Transfer RNA biogenesis [BR:
pcia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Q6344_00440 (truB)
Prokaryotic type
Q6344_00440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
MCM_bind
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WLG13861
LinkDB
All DBs
Position
99178..100257
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AA seq
359 aa
AA seq
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MSIASTQADKKSSNHPNKIKVSGVILVDKPKGMTSQQVVSKVKYLFKSPNHESKKAGHTG
TLDPMATGLLPICMGEATKFSHYQLDADKSYQATILLGGQTDTGDADGQIVAQAPIPKFD
DVLLDKVAQQFLGAQQQIPPMYSALKKDGKKLYEYARAGIEVERAPRGIVIKAIDLKALD
HEKIQLTVTCTKGTYVRVLGEDIAKAMGTLGHLTALRRTQVGDFKINDAITLSDLEVLAF
DNRQEQLMPVDACINIEAEMVLTVEQCERIHMGQRLNVFEQLTDSLRDYISTSISHQSSV
SENNDIQLDSDMVNSEDDQQPLIHEIPADIRLINQQGQFLGLGAVSLNGRLQPKKLIQR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgcatctacgcaagcggataaaaagtctagtaatcaccctaacaagattaaa
gtctcgggtgttattttagttgataaacccaaaggcatgacttcacagcaagtggtgtca
aaggtgaagtatctttttaagtcgccaaatcatgaaagtaaaaaagcggggcacacaggg
acacttgatccaatggcaaccggtctattgccgatttgtatgggtgaagcgacgaaattt
agtcattatcagctagatgcagataaatcttatcaagcaactattctacttggtggtcaa
actgatacgggtgatgccgatggtcaaatcgttgcacaagcacccattccaaaatttgat
gatgtgcttttagacaaagtcgcccagcagtttttaggtgctcagcagcagataccaccg
atgtattctgcactaaaaaaagatggcaaaaaactctatgagtatgctcgtgcgggaatt
gaggtagaacgagcgcctagaggtattgtaatcaaggccattgatttaaaagcgcttgat
catgagaaaattcaattgacagtgacctgtactaaagggacttatgtgcgtgtactcggt
gaagacatcgctaaagcgatgggtacattagggcatttgactgcattacgccgtacgcag
gttggtgattttaaaatcaatgatgcgattactttgtcagacttggaagtattagcgttt
gataacaggcaagagcaattaatgccggtagatgcttgcattaatattgaagctgagatg
gtattgacggttgagcagtgtgagcgtatacacatgggtcaacgtttgaatgtatttgag
caactgacagacagtctgcgcgactatatttcaactagtatcagtcatcagtcgtctgtg
tcagaaaacaacgatattcaactagatagtgatatggttaatagtgaagatgaccaacaa
cccttgatccatgagattccagctgatattcgtttgataaatcagcaaggtcagtttctt
ggattgggtgccgtaagtctcaacggtagattgcagcctaaaaaattaatccagcgttaa
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