Psychrobacter cibarius: Q6344_02805
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Entry
Q6344_02805 CDS
T09259
Name
(GenBank) FAD-binding domain-containing protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcia
Psychrobacter cibarius
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcia03400
]
Q6344_02805
Enzymes [BR:
pcia01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Q6344_02805
DNA repair and recombination proteins [BR:
pcia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Q6344_02805
Prokaryotic type
Q6344_02805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
FAP42_B2
Motif
Other DBs
NCBI-ProteinID:
WLG14296
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Position
complement(672894..674579)
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AA seq
561 aa
AA seq
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MSKTAAETSHNTDSTETSNVNNSDDANSVNPEHYLMWFRRDLRVHDNTALAALCEQANAD
NASVSAIYFVTPEQWQAHDMSLTQLDHIARTLPILAKDLQTQLNIHLTVQLCPSFTDCVE
AMLDICSANQISTVMANHEYEGNEIKRDEQLTKQLANNDIEFVRWHDQCILPPQTITTND
DSMYQVFTPFYKKWRHTLDISTIQMHEASAINGNTKVKLEVSNASATIEDIERVTKEVVE
DYQKALQNAGLLEPMDIDVQLEHARAAYPAGETAACQRLEDFIADDIDNYDVSRDVPSLH
ATSQLSAYLTIGAISPRLCYLQATLQLSKALGELHGNDGDTLDSGDSFDNTDNNDINRWI
SELAWRDFYRHVLDYKPELIRHQAYKHETDVKINWSYNQDDFAAWCIGKTGVPLVDAAMR
CLNTTGFMHNRLRMVTAMFLTKDLLIDWRLGERYFMQQLIDGDFSSNNGGWQWSASTGTD
AAPYFRIMNPFSQAKTHDTDGEFIKTWLPELKAIPASILHSEDKMRQALTKGGKFADIDY
PLPMVEHKAARQLVIAEFKKQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacggcggcggaaacgtctcataacacagatagcaccgaaacaagcaacgtc
aacaatagcgacgatgccaatagcgtaaacccagagcattatttaatgtggtttcgtcgt
gacctgcgagttcatgataataccgcgctagctgcgctttgcgagcaggcaaatgcggat
aacgcctcagtaagcgctatttacttcgtgacgcctgaacaatggcaagcccatgacatg
tcgctgacacagctcgaccatatcgcacgcaccttgcctatcctcgcaaaagacctacaa
acgcaattaaatatccacttaacagtacagctctgtccaagctttactgactgtgttgag
gcgatgctagatatctgtagcgcgaaccagatcagcactgtgatggcaaatcacgagtac
gaaggcaatgagattaagcgtgatgagcaattaaccaaacagcttgcaaacaacgatata
gaatttgtccgctggcatgatcaatgtatcttgccaccacaaaccatcaccacgaacgat
gacagcatgtatcaggtgtttaccccattttataaaaaatggcggcataccttggatatc
agcaccatacaaatgcatgaggcatccgccataaatggcaacactaaagtcaaactagaa
gtctcaaacgccagtgctactatcgaagatatagaaagagtaactaaagaagtagtcgaa
gattatcaaaaggcactgcaaaatgctggtttattagagcccatggatatagacgtacag
cttgagcacgctcgggcagcctaccctgctggcgaaacggcggcgtgccagcgtttagag
gacttcatcgctgatgatattgataactacgatgtgagccgtgatgtaccaagcttacat
gcgaccagtcagctatctgcctacctgactattggcgcaatcagccccagactttgctac
ttacaagctaccctacaattaagcaaagcactgggagaattacatgggaatgacggagac
accttagatagcggggatagctttgacaacactgataataatgacattaaccgctggata
agcgagctggcttggcgtgacttttatcgtcatgttttagactataagcccgagctgatt
cgccatcaagcgtataaacatgagactgatgtcaaaattaactggtcatacaatcaagac
gattttgcagcatggtgcataggtaaaactggcgtgccgttagtcgatgcggcaatgcgc
tgcctgaatacgacgggctttatgcacaatcgcttgcggatggtcacggcgatgtttttg
accaaggatttattgattgattggcgcttaggtgagcgctactttatgcagcagctgata
gatggtgacttttcgtccaataatgggggttggcaatggagcgcctcaacaggtaccgat
gctgcaccttactttcgtattatgaacccttttagccaagccaaaacccacgataccgat
ggcgaatttatcaagacgtggctgcctgagctaaaagccattcctgccagcatcttgcat
agcgaggataaaatgcgtcaagcactgacaaagggcggtaagtttgctgatattgattac
ccattaccgatggtcgaacataaagcggctcgccaattagtgattgctgaatttaaaaaa
cagtaa
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