Psychrobacter cibarius: Q6344_08560
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Entry
Q6344_08560 CDS
T09259
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcia
Psychrobacter cibarius
Pathway
pcia00061
Fatty acid biosynthesis
pcia00071
Fatty acid degradation
pcia01100
Metabolic pathways
pcia01212
Fatty acid metabolism
pcia02024
Quorum sensing
pcia04146
Peroxisome
Module
pcia_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q6344_08560
00071 Fatty acid degradation
Q6344_08560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q6344_08560
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q6344_08560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcia01004
]
Q6344_08560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcia04147
]
Q6344_08560
Enzymes [BR:
pcia01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q6344_08560
Lipid biosynthesis proteins [BR:
pcia01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q6344_08560
Exosome [BR:
pcia04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q6344_08560
Exosomal proteins of breast cancer cells
Q6344_08560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SCAMP
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WLG12660
LinkDB
All DBs
Position
complement(2058351..2060036)
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AA seq
561 aa
AA seq
DB search
MDQFWTQHYPKGINAQIAPPHNTLIDMFDDKLTEYASHKFITNMGVTYSYGQVDSMSLAI
AAWVQSLGLAKGSVIGIMMPNVNQYLPIVIGVIRAGMVTTLINPLYSPRELRHQLADSDT
AVLFILEPFCKTLEKIIKDTPVKTVVISKIGDMLGVVKGALVNIAAKYVKKAIPRYQLKS
NSHYTVTRYKAVLKRAKKLSYSRPTIQADDLLMLQYTGGTTGVAKGILITNQNVVTATYQ
FVEWFKPVYDAMSDSTQINTIVALPLYHIYAFICSIVGLSVGQHLTLVTNPRDIEGFIKI
LRKRPFHLLPGVNTLFQALLMNPKFKELDFSACKLTLVGGMAATPETAKRWREVTGLPIL
EGWGMSETLGVGTANPFNGTEYSGNVGLPLPSVDINIRDDDENILAINEVGEMCIKGDNV
ITHYHNIDNTTFFTADGYLKTGDIASMNEQGAIKIYDRKKDMIIVSGFNVYPNEVENIIE
EHPKVAECSVVGIDDELQGQSVKAYVVKSDDSLNEDDIKALCQANLAAYKCPRHIEFIDE
LPKSTVGKILRHKLRKLAHEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttttggacgcagcattatcctaaagggataaatgcacagatagcgccgcca
cataatacattgattgacatgtttgatgacaaattaacagaatatgccagccataaattt
atcaccaacatgggtgttacttattcttatgggcaagtggatagcatgtcattggctatt
gcggcttgggttcaaagtctgggtctagcaaagggttcggtcataggcatcatgatgccc
aatgtcaaccagtacctgcctattgtcataggggtaattcgcgctggtatggtcacaacg
ctcatcaatccgctgtatagtcctcgtgaattgagacatcaattggctgactcagatact
gctgtattatttatattagaaccattttgcaaaacgttagagaaaattatcaaagacacg
cctgtcaaaaccgtggtcatcagcaagattggcgatatgttaggagtagtgaaaggtgcg
cttgttaatatcgctgccaaatatgtcaaaaaagccattccccgttatcagttgaaatcc
aattctcattataccgtgactcgctataaagccgttttaaaacgcgccaaaaaattaagt
tattctcgtcctaccattcaagcggacgacttattaatgctgcaatatactggcggtacg
acaggtgttgccaaaggtattttgattaccaatcaaaatgttgtgaccgccacttaccag
tttgtcgaatggttcaagccagtctatgacgccatgtctgatagtactcaaataaatacc
attgtcgctttaccgctgtatcatatttatgcgtttatctgctcaatagttgggttgagt
gtgggtcagcatctcacactggttaccaatccacgtgatattgaagggtttatcaagata
ttgcgcaagcgtccttttcatctattgcctggtgttaatactttgttccaagccctgctg
atgaacccaaaatttaaggagctggatttttccgcatgcaaattaaccctagttggtggt
atggcagcgacccctgaaaccgctaagcgctggcgtgaagtcacaggtctgcctatcctc
gaaggctggggtatgtctgagacgctaggcgtgggtaccgccaatccatttaatggcact
gaatatagtggcaatgtagggttaccactgcctagtgtcgatatcaatatccgtgatgac
gatgaaaatattctcgccataaatgaagttggtgagatgtgtatcaaaggtgacaacgtc
attactcattatcataatattgacaatacgacgttttttaccgctgatggttacttaaaa
acaggtgatattgcttctatgaacgagcagggtgctatcaaaatatatgaccgtaaaaaa
gacatgattatcgtcagtggcttcaacgtttatcctaacgaagtagaaaacatcattgag
gagcaccctaaggttgccgaatgttcagtggtgggtatcgatgatgagttgcagggtcag
tcggtcaaagcctacgttgtaaaatctgatgacagcttaaatgaggatgatattaaagcg
ctgtgccaagcaaatttggccgcctataaatgcccgcgtcatatcgaattcatagacgag
ttacccaaatcaactgtcggaaaaatactgcgtcacaagctgagaaaattggctcatgaa
gcgtaa
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