Psychrobacter cibarius: Q6344_13045
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Entry
Q6344_13045 CDS
T09259
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcia
Psychrobacter cibarius
Pathway
pcia00071
Fatty acid degradation
pcia00280
Valine, leucine and isoleucine degradation
pcia00310
Lysine degradation
pcia00362
Benzoate degradation
pcia00380
Tryptophan metabolism
pcia00410
beta-Alanine metabolism
pcia00640
Propanoate metabolism
pcia00650
Butanoate metabolism
pcia00907
Pinene, camphor and geraniol degradation
pcia00930
Caprolactam degradation
pcia01100
Metabolic pathways
pcia01110
Biosynthesis of secondary metabolites
pcia01120
Microbial metabolism in diverse environments
pcia01200
Carbon metabolism
pcia01212
Fatty acid metabolism
Module
pcia_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Q6344_13045 (fadB)
00650 Butanoate metabolism
Q6344_13045 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Q6344_13045 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Q6344_13045 (fadB)
00310 Lysine degradation
Q6344_13045 (fadB)
00380 Tryptophan metabolism
Q6344_13045 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Q6344_13045 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Q6344_13045 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Q6344_13045 (fadB)
00930 Caprolactam degradation
Q6344_13045 (fadB)
Enzymes [BR:
pcia01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Q6344_13045 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Q6344_13045 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Q6344_13045 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Q6344_13045 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
WLG13512
LinkDB
All DBs
Position
complement(3065640..3067799)
Genome browser
AA seq
719 aa
AA seq
DB search
MVYQGNRITVTMLEDGIANMQYNAENESVNKFDAETNKQFGEAVTALEKADDVKGLIVTS
GKGVFIAGADITEFVGSFKKPESEIKDWVVGINDAFNRFEDLPFPKVAAINGAALGGGCE
MTLVCEYRVMSDKAIIGLPETQLGIFPGFGGTVRTTRVIGIDNALELIATGTPKKPLDAL
KLGLVDATVAADDLQDAAIDLVKKCISGELDWKAKREEKLNPVKLNQLEQAMAFNSAKGM
IFAKANPKQYPAPALAIAAMEKHVNLPRDKAIEVEAAGFAKAAKTPQAESLVGLFLSDQL
VKKLAKQHSKKAHEINEAAVLGAGIMGGGIAYQAASKGLPIIMKDIKSEQLDLGMGEASK
LLGKMVDRGKMTPAKMGETLSRIRPTLNYGDFSETDIVIEAVVENPNVKRAVLKEVEGLV
KDDCILASNTSTISITFLAEALERPENFVGMHFFNPVHRMPLVEVIRGEKSSEEAIATTV
ALASKMGKVPVVVNDCPGFLVNRVLFPYFGAFDLLLKQGADFAHVDKVMEKFGWPMGPAY
LIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIELLYENKRLGQKNGVGFYKYEMDKRGK
PKKVADEATYELLKTTTDSDKQTFEDQAIIDRTMLAFCNETVRCLEDNIVSTPSEADMAM
IMGVGFPPFRGGPCRYIDQMGLDNYLALCEKYAYLGKAYEAPQKIRDMAAAGETFYATA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggtataccaaggaaatcgcatcacggtgacaatgctagaggatggcatcgccaacatg
cagtacaacgccgaaaatgagagcgtgaacaagtttgatgctgagaccaacaagcaattt
ggtgaagcggttactgccttagaaaaagctgacgacgtcaaaggtttaatcgtgacctca
ggcaaaggcgtctttatcgctggtgctgatatcacagaattcgttggctcttttaaaaag
ccagaaagcgagattaaagattgggtcgtaggtatcaatgacgcctttaaccgctttgaa
gacctgcctttcccgaaagtagccgccatcaatggcgcggcgcttggcggtggttgtgag
atgaccttggtttgtgaatatcgcgtcatgagcgacaaagccatcatcggtctaccagaa
acccaactgggtattttcccaggtttcggtggtacggttcgtaccacgcgtgtgattggt
atcgacaatgcgcttgagctgattgcgacgggtacaccaaaaaaaccacttgatgctcta
aaattgggcttggtagatgcgactgttgctgctgatgatttgcaagatgctgccattgat
ttggtcaaaaaatgtatctcaggtgagcttgattggaaagcgaagcgtgaagagaagctg
aatccagttaaattgaatcagcttgagcaagcgatggcatttaacagcgctaaaggtatg
atctttgccaaagccaatcctaaacagtacccagcaccagcacttgctatcgctgcgatg
gaaaaacacgttaacttaccacgtgataaagcgattgaagtagaagccgcaggttttgca
aaagcggcgaaaacgccacaagcagaaagcttggttggtttgttcttaagcgatcagttg
gttaaaaaattagccaagcagcatagcaaaaaagcacatgaaatcaatgaagcggcagta
ctaggcgcaggcatcatgggcggcggtattgcttatcaagccgctagtaaaggcttgcca
atcattatgaaagacatcaagtctgagcaattagatcttggtatgggagaagccagcaag
ttacttggcaaaatggttgatcgcggcaaaatgaccccagcaaaaatgggcgaaacctta
agccgtatccgtcctactttgaattacggcgatttttctgagactgatatcgttatcgaa
gcagtggtagaaaatccaaacgtgaagcgtgcggttcttaaagaagttgaaggcttagta
aaagacgattgtatcctagcgtcaaacacctcgaccatctctattactttcttggctgaa
gcacttgagcgtccagaaaacttcgtgggtatgcatttctttaacccagtacaccgtatg
ccattggttgaagttatccgcggtgagaagtcctctgaagaagcgattgcgaccacggta
gcgctagcctctaaaatgggtaaagtacctgttgtggttaatgactgcccaggtttctta
gtcaaccgtgtgttgttcccatattttggtgcctttgatttgctattgaagcaaggtgca
gattttgctcatgtcgataaagtcatggaaaaatttggctggccgatgggtcctgcttat
ctaatcgacgtggtcggtctagacacgggtgttcacggcgcagaagtcatggcagaaggt
ttccctgatcgcatgaagcctgattataaaggcgctattgagcttttatatgaaaacaaa
cgcttaggtcagaaaaacggcgttggtttctataagtatgaaatggacaaacgcggcaag
ccaaagaaagttgctgatgaagccacctatgagctattaaaaaccaccacagatagcgac
aagcaaacgtttgaagatcaagcgattattgaccgcaccatgctggctttctgtaatgag
actgtacgttgcctagaagacaacatcgtcagcacgccgtcagaagcggatatggcgatg
attatgggcgttggtttcccgccattccgcggtggaccttgccgttatatcgaccaaatg
ggtctagataactacttggcactgtgtgaaaaatacgcataccttggcaaagcttatgaa
gccccgcaaaaaattcgcgatatggcagcagcaggcgagaccttttacgccaccgcgtaa
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