Proteus terrae subsp. cibarius: F9282_00210
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Entry
F9282_00210 CDS
T06330
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib00541
Biosynthesis of various nucleotide sugars
pcib01100
Metabolic pathways
pcib01250
Biosynthesis of nucleotide sugars
Module
pcib_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F9282_00210 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcib01005
]
F9282_00210 (rfaD)
Enzymes [BR:
pcib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
F9282_00210 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pcib01005
]
Core region
F9282_00210 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Ldh_1_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QGW01516
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All DBs
Position
complement(42482..43420)
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AA seq
312 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDEGYTDILVVDNLKDGTKFVNLVDLNITDYMDKEDFIASI
VAGDDFGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHFCLERQIPFLYASSAATY
GGRTDNFIEDRKYEAPLNVYGYSKFLFDEYVRQILPEADSMICGFRYFNVYGPREGHKGG
MASVAFHLNNQVNAGQNPKLFEGSETFQRDFIYVGDVAAVNLWFWRNNVSGIFNCGTGRA
ESFQAVADAVIAHHKDKDLSIEHIEFPEKLKGRYQAFTQADLTNLRKAGYSAPFKTVAEG
VELYMQWLNQGK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcactggcggtgcgggttttatcggcagcaatattgttaaagcattaaat
gatgaaggttatactgatatcttagttgttgataaccttaaagatggtaccaaatttgtg
aatttggttgatctaaatatcactgattacatggataaagaagattttattgcaagcatt
gttgctggtgatgatttcggtgatattgatgccgttttccatgaaggtgcttgctcttcc
acgacagagtgggatggcaaatatatgatggataacaactatcaatattctaaagagcta
cttcatttttgtcttgaacgccaaattcctttcttatatgcctcttctgctgcaacttat
ggtggtcgtacagataactttatcgaagatagaaaatatgaagcgcctttaaatgtctac
ggctattcaaaattcttattcgatgaatatgtacgccagattttacctgaagcagattca
atgatttgtggcttccgttattttaatgtttatggcccccgtgaaggacataaaggtggt
atggcgagtgttgcattccatttaaataaccaagtcaatgcgggtcaaaatccaaaatta
tttgaaggtagcgaaaccttccaacgcgactttatttacgttggagatgtggctgcggtt
aatttatggttctggcgcaataatgtatcaggtatttttaactgtggtacaggtcgagct
gaatcattccaagctgttgccgatgctgttattgctcatcataaagataaagatctctct
atcgaacatattgagttccctgagaaattgaaaggtcgttaccaagcctttactcaagct
gacctgacaaatttacgtaaagcaggttattccgcaccttttaaaacagttgctgaaggt
gtagagctttatatgcaatggttaaatcaaggtaagtaa
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