Proteus terrae subsp. cibarius: F9282_00955
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Entry
F9282_00955 CDS
T06330
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9282_00955 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcib03021
]
F9282_00955 (rho)
03019 Messenger RNA biogenesis [BR:
pcib03019
]
F9282_00955 (rho)
Transcription machinery [BR:
pcib03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F9282_00955 (rho)
Messenger RNA biogenesis [BR:
pcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F9282_00955 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
QGW01645
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All DBs
Position
181877..183136
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELIALGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVN
FDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEEFFDFMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccggtatcagaactgatagcacttggcgaaaat
atggggctagagaatctggctcgaatgagaaagcaagacattattttctctatcttgaag
caacacgcgaaaagtggagaagatattttcggtgacggtgtgctggaaatattgcaggat
ggcttcggcttcctacgttccgcagacagttcctaccttgctggtcccgatgatatctac
gtttctccaagtcaaattcgccgttttaaccttcgcactggtgacaccatcgcagggaaa
attcgtcctcctaaagaaggtgaacgttattttgcccttctaaaagttaatgaagttaac
tttgataaaccagaaaatgctcgcagtaaaatcctctttgaaaacttaacacctttacat
gctaataatcgtttacgcatggaacgtggtaatggctctacagaagacttaaccgcgcgt
gttcttgacttagcggcgccaattggccgcggtcaacgcggtcttattgttgctccacca
aaagcaggtaagactatgttgctgcaaaatattgcagcaaatattgctcataactatcct
gattgcgtattaatggtacttctgattgatgaacgtccagaagaagtgacagaaatgcaa
cgcttagtaaaaggtgaagttatcgcttcaacctttgatgaaccagcttctcgtcacgta
caagttgcagaaatggtgattgaaaaagcgaagcgtctagttgagcataaaaaagacgtt
atcatcctgttagactccatcacacgtttagcgcgtgcttataacaccgttgttccttca
tcaggtaaagtgttaacaggtggtgtggatgcaaacgcattacatcgtcctaaacgtttc
ttcggtgcggctcgtaatgttgaagaaggtggtagcttaactatcattgcaacagcatta
gtcgatacgggttctaagatggacgaagttatctacgaagaatttaaaggtacaggtaat
atggaattacacctgtctcgtaaaattgctgaaaaacgtgttttccctgcgattgattac
aatcgttctggtacacgtaaagaagagttactgacgtctcaagatgagctacaaaaaatg
tggatcctgcgtaaaattattcatccaatgggtgagattgacgcaatggaattcctcatt
aataagttagcaatgactaagacaaatgaagaattcttcgactttatgaaacgttcataa
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