Proteus terrae subsp. cibarius: F9282_01080
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Entry
F9282_01080 CDS
T06330
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib00300
Lysine biosynthesis
pcib00470
D-Amino acid metabolism
pcib01100
Metabolic pathways
pcib01110
Biosynthesis of secondary metabolites
pcib01120
Microbial metabolism in diverse environments
pcib01230
Biosynthesis of amino acids
Module
pcib_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F9282_01080 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F9282_01080 (dapF)
Enzymes [BR:
pcib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
F9282_01080 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
I-TevI_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
QGW01663
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All DBs
Position
206946..207770
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRHTGVGFDQLLVVEAPYDPELDFHY
RIFNADGSEVTQCGNGARCFARFVRLKGLTNKREIKVSTQSGRMTLNVMDNDDVCVNMGE
PEFEPQKIPFRAQKAEKTYIIRAMERTVLCGVVSMGNPHCVIQVEDIKTAEVELLGPVLE
QHERFPERANIGFMQIVDRSNLHLRVFERGAGETKACGSGACAAVAIGISQGLLDKRVKV
TLPGGSLLIEWKGEGNSLYMTGPATHIYDGIIQL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcaaaaatgcatggtcttggcaacgactttatggtggtcgatgctgtgact
caaaatgtttatttttcaccagaattaatctgtcgattagcagatcgccatactggtgtt
gggtttgatcaattgttggtggttgaagcaccttatgatcccgaactcgatttccattat
cgcatttttaatgcagatggaagtgaagttacacagtgcggtaatggtgctcgttgcttt
gctcgatttgtgagattaaaaggccttacaaacaaaagagagataaaagtcagtacacag
tctggcagaatgactttgaatgttatggacaatgacgatgtgtgcgtcaatatgggcgaa
cctgagttcgaacctcaaaaaatccctttccgtgcacaaaaggcagaaaagacctatatt
atcagggcaatggaacgcactgtattgtgcggtgtcgtttcaatgggaaatcctcattgc
gttattcaggttgaggatattaaaacagcagaagttgagttgttagggccagtgttagag
caacatgaacggttccctgaacgtgctaatattggttttatgcaaatcgtagacagaagt
aaccttcatttacgggtgtttgaacgtggtgctggcgaaacgaaagcttgtggtagcggg
gcttgtgcagcagttgcaattggtatttcacaaggtttattagataaacgagtgaaggta
actttaccgggtggatcgttgctaattgaatggaaaggagagggtaactctctttatatg
actgggcctgcgacgcatatttatgatgggatcattcagctataa
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