Proteus terrae subsp. cibarius: F9282_01480
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Entry
F9282_01480 CDS
T06330
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9282_01480 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcib03019
]
F9282_01480 (pnp)
03016 Transfer RNA biogenesis [BR:
pcib03016
]
F9282_01480 (pnp)
Enzymes [BR:
pcib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F9282_01480 (pnp)
Messenger RNA biogenesis [BR:
pcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F9282_01480 (pnp)
Transfer RNA biogenesis [BR:
pcib03016
]
Prokaryotic type
tRNA degradation factors
F9282_01480 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QGW01735
LinkDB
All DBs
Position
288923..291052
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AA seq
709 aa
AA seq
DB search
MLNPTVRKFQYGQHTVSLETGMMARQATAAVMVDMDGTAVFVTVVAKKKVKAGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQIVATVVSV
NPQVNPDIVAMIGASAALALSGVPFNGPIGGARVGFIDGQYVLNPTVDELKVSKLDLVVA
GTAGAVLMVESEADLLSEEEMLGAVVFGHDQQQVVIENINALVAEVGKEKWDWAPEAINQ
TLHDRIAQLAQARIGDAYRITEKQERYEQIEAIRDDVIATLVAEDETLDEAEISEIFSGL
EKNIVRARVLAGEPRIDGREKDMVRALDIHTGLLPRTHGSALFTRGETQALVTATLGTAR
DAQTIDDIMGEHTDTFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKESVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRNGVSALQMDIKIEGITREIMQVALNQAKSARLHILGVMEDA
ISQPRADISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
SGDQAKQAIARIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVSDYLEMGQEVPVKVLEIDRQGRIRLSMKEAQANQQEATETSSEDSAN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctacagttcgtaaatttcaatacggtcaacataccgtttcattagaaaca
ggtatgatggctcgtcaagcaacagccgctgttatggttgacatggacggcaccgctgtt
tttgtcactgttgttgcaaagaaaaaagttaaagctggacaagatttcttcccattaact
gttaactaccaagagcgttcatacgctgctggtcgtatcccaggtagcttcttccgtcgt
gaaggtcgtcctggtgaaggcgaaacgttaattgcacgtttaattgaccgccctttacgc
ccattattccctgaaggtttcttaaacgaaattcaaatcgttgctaccgttgtttctgtt
aacccacaagttaacccagatatcgttgcaatgattggtgcttctgcagcattagcgctg
tcaggtgttccattcaatggccctatcggtggtgctcgtgttggttttatcgatggacaa
tatgttctaaacccaacagttgatgagctgaaagttagtaaattagatttagtggttgca
ggtactgcaggtgcggtactaatggtagaatcagaagctgatttattatcagaagaagaa
atgctaggtgcagtcgtatttggtcatgatcaacaacaagttgtgatcgaaaacatcaat
gcattagtggcagaagtgggtaaagagaaatgggattgggcgccagaagctatcaaccaa
actttacacgaccgtattgcacaattagcacaagctcgcattggtgatgcttaccgtatc
actgaaaaacaagagcgttatgaacaaatcgaagctattcgtgatgacgttattgcgaca
ttagttgctgaagatgaaactttagatgaagctgaaatcagtgaaatcttctcaggtctt
gagaaaaacatcgttcgtgctcgcgtattagcgggtgaaccacgtatcgatggtcgtgaa
aaagacatggtacgtgcattagacattcacactggtttattaccacgtactcacggttca
gcactgtttactcgtggtgaaactcaggcactggttactgcaacattaggtactgcacgt
gatgctcaaactattgatgacatcatgggtgagcacacagatactttcttactgcactat
aacttccctccatactctgttggtgaaacaggcatgatgggttcaccaaaacgtcgcgaa
atcggtcatggccgtttagcaaaacgtggtgtgttagcagtaatgccaacaattgaagaa
ttcccatatactgttcgcgtggtttctgaaatcactgaatcaaatggttcatcttcaatg
gcgtctgtttgtggtgcttctttagcactgatggatgcaggtgtaccaattaaagaatct
gttgcaggtattgcaatgggtctagtgaaagaaggcgacaactttgttgttctttccgac
attctgggtgatgaagaccatttaggcgatatggactttaaagttgcgggtagccgtaac
ggtgtcagcgcattacaaatggatatcaagatcgaaggtatcactcgcgaaattatgcaa
gttgcattaaaccaagcgaaaagcgcacgtttacacattttaggtgtaatggaagatgca
attagccaacctcgtgctgatatttctgaatttgcaccacgcattcatactatcaaaatt
aatccagacaagatcaaggacgttatcggtaaaggtggctcagttatccgtgcattaacg
gaagaaacaggcacaactatcgaaatcgaagatgatggtacagtgaagattgctgcaaca
agtggcgaccaagcaaaacaagctatcgctcgtatcgaagaaattactgctgaagttgaa
gtgggtcgtatctacaacggtaaagtaactcgtatcgtagatttcggtgcattcgttgct
atcggtggcggcaaagaaggtctggttcatatttctcaaatcgcagacaaacgcgttgag
aaagtgagtgactacttggaaatgggtcaagaagttccagttaaagtactggaaattgac
cgtcaaggtcgtattcgcttaagcatgaaagaagctcaagctaatcagcaggaagcaaca
gaaacttcttctgaagattctgcaaattaa
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