Proteus terrae subsp. cibarius: F9282_01490
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Entry
F9282_01490 CDS
T06330
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9282_01490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcib03019
]
F9282_01490
03009 Ribosome biogenesis [BR:
pcib03009
]
F9282_01490
Enzymes [BR:
pcib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F9282_01490
Messenger RNA biogenesis [BR:
pcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F9282_01490
Ribosome biogenesis [BR:
pcib03009
]
Prokaryotic type
rRNA helicases
F9282_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QGW01737
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All DBs
Position
292224..294080
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AA seq
618 aa
AA seq
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MTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLNGNDVLGMAQTGSGKTAA
FSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENILSKIPA
EHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTFGARKNEALIRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQSLREQTLERLKNGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKMTIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQGEEALD
METLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRRDNDRERSPRRERRDAGEMDL
YRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPTDLLSHFTRT
RIMNKPLNMQLVGDAQSQPFRERRNNSRRDGQPQGGRRFNNGDQPQRRGNNDRGGERGNF
RSRSNEGTPRRRSSSHNQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaccgatatgacttttgctgatctaggtttatcagcacctattttgact
gcactgaatgatttaggctacgagaagccttctccaattcagcaacaatgtattcctttc
cttttaaacggcaatgatgttttaggtatggcacagacaggtagtggtaaaactgccgca
tttagcctgccactattgcataatcttgatgaatcattaaaagcaccacaaattttagtt
ttagcaccgactcgtgaacttgcggttcaggttgctgaagcaattgaagatttctctaag
catttaccaaaagtaaatgttgttgcactgtatggtggtcagcgttacgacgttcaatta
cgtgcgttacgccaaggaccacaagttgttgtgggtacaccgggtcgtttattagaccat
ttaaaccgtggcacattagatttatctaaactgaaaggcttagtattagatgaagctgat
gaaatgttacgtatgggctttattgaagatgttgaaaacattttaagtaagatcccagca
gaacaccaaacagcactgttctctgcaacaatgccagaagctattcgtcgtattactcgt
cgtttcatgaatgatccgaaagaagtacgcattcaaagtagcgtaacaacacgtccagac
attagccaaagctattggatgacattcggcgcacgtaaaaatgaagcgttaattcgtttc
ttagaagctgaagattttgatgcggcgattattttcgttcgtactaaaaacgcaacatta
gaagttgctgaagctttagagcgtaatggttataacagcgcagcgttaaatggtgatatg
aaccaatcactgcgtgagcaaacattagagcgtctgaaaaatggtcgtttagacatttta
atcgcgactgacgttgctgctcgtggtcttgacgttgaccgtatcagccttgttgtgaac
tatgatatcccaatggattcagaatcttatgttcaccgtattggccgtacaggtcgtgcg
ggtcgtgccggccgtgcaattttattcgttgataaccgtgagcgtcgtttactgcgcaat
atcgaacgtacaatgaagatgactattcctgaagtagaactgccaaatgcagaacttatc
agccaacgtcgtcaggaaaaatttgcacagcaaatcgcgcaacaattagaaactagcaac
cttgatcagtaccgtgctctgttacctaaattagctccacaaggtgaagaagcgctggat
atggaaacactggctgcggtattactgaaaatggctcaaggtgagcgtgcgcttatcctg
ccaccagatccagttcgtcgtcctcgtcgtgaatttaacgatcgtgatgatcgtcgtcgt
gataacgatcgtgagcgttctcctcgtcgtgaacgtcgtgatgctggcgaaatggattta
taccgtatcgaagtgggtcgtgatgatggtgttgaagttcgtcatatcgttggtgcgatt
gctaacgaaggcgatatcagcagccgttacattggtaatatcaaactgtatggttctcac
tcaaccatcgaattaccaaaagggatgccaacagacttattaagccatttcacacgtaca
cgtattatgaacaaaccactgaatatgcaattagtgggtgatgctcaatctcagcctttc
cgtgagcgtcgtaataacagtcgtcgtgatggtcagccacaaggtggtcgtcgttttaac
aatggtgatcaaccacaacgtcgtggtaataacgatcgtggtggcgaacgcggtaacttc
cgtagtcgtagtaacgaaggtacgcctcgtcgtcgtagcagttctcataaccaataa
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