Proteus terrae subsp. cibarius: F9282_02485
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Entry
F9282_02485 CDS
T06330
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib02020
Two-component system
pcib02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F9282_02485 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F9282_02485 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcib03021
]
F9282_02485 (rpoN)
Transcription machinery [BR:
pcib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F9282_02485 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PaRep2b
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QGW01916
LinkDB
All DBs
Position
complement(512925..514403)
Genome browser
AA seq
492 aa
AA seq
DB search
MKQSLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQQALESNPLLEQDDDQQDPVSDD
TSHTESQSDSTKTTTENEVEEFDTLDALEQKEMPDDLPLDTQWEEIYTAGTPSGTSNDYT
DDELPLYQGETTTSLQDYLTWQADLTPFSETDRAIAISIIDAIDETGYLTVTTDDILAGM
GDDELELDEVEAVLKRIQRFDPIGVAARDLKECLLIQLSAFSTETPYLKETQLVISQYLE
LLGNRDFRQLMRQTKLREETLKSVIEMIQSLDPKPGLSIDTGESEYVIPDILVKKSGERW
QVELNTDSIPRLRINETYAALGQSTQNESDGKFIRDNLQEAKWLIKSLESRNETLLKVAH
CIVDTQQAFFELGEEHMKPLVLADIAEQVEMHESTISRVTTQKFLHCPRGIFELKYFFSS
HVNTDSGGEASSTAIRALVKKLIAAENPAKPLSDSKLADMLGELGIQVARRTVAKYRESL
SIPPSNQRKELV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagtctgcaacttcgtcttagtcagcaactggcaatgacgccacagctacaa
caggctattcgtttgttgcaactttcgacgcttgaattacaacaagaaattcagcaagca
cttgagtctaatccacttctagaacaagacgatgatcaacaagatcccgtttcagatgat
acctctcatacagaaagtcagtcagactccacaaaaacaacaactgaaaacgaagttgaa
gagttcgatacactggatgctttagagcaaaaagagatgcctgatgatctccctttagat
actcaatgggaagaaatctacaccgcaggcacaccttctggcaccagtaatgactatact
gatgatgaacttccactgtatcaaggcgaaacaaccacttcattgcaagattatctaacc
tggcaggctgatctcactccattttcagaaacagacagagcaattgcgataagtattatt
gatgctattgatgaaacaggatatttaactgtcacaacagatgacatccttgctggaatg
ggcgatgatgagctagagcttgatgaagtcgaagctgtattaaaacgtatccaacgcttt
gatcctattggtgttgctgcgcgtgatttaaaagagtgtcttttgattcagctatccgct
ttttcaacagaaacaccttatcttaaagaaacgcagttagtgattagccaatatttagag
ttgctaggtaaccgtgattttcgccaattgatgcgtcaaacgaagttacgagaagagaca
cttaaatctgttattgagatgatccagtctcttgatcctaagcccggattaagtattgat
acaggcgagtcagagtatgttattccagatatactggtaaaaaaatcaggtgaacgctgg
caagttgagttaaatacagatagcattcctcgcctacgaataaatgagacctatgcggca
ttgggtcaatcgactcaaaatgagagcgatggaaaatttattcgtgacaatttacaagaa
gccaaatggctgataaaaagtctagaaagccgtaatgagacattattaaaagtcgctcat
tgcattgttgacacacagcaagcatttttcgaattgggtgaagagcatatgaaacccctt
gtgttagcagatattgctgagcaggttgaaatgcacgaatccaccatttctcgagtgaca
acgcaaaaatttttgcattgtccaagaggaattttcgaattgaagtattttttctctagc
catgtgaatactgatagcggaggcgaagcctcttcaacagcaatcagggctttagtgaag
aaactaatcgcagcagaaaacccagcgaaaccacttagtgatagtaaactggctgatatg
ctcggagagcttggaatacaagttgctcgacgcactgttgcgaagtatagagagtcatta
tccatcccgccttcaaatcaacgcaaagagttggtttga
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