Proteus terrae subsp. cibarius: F9282_03815
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Entry
F9282_03815 CDS
T06330
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcib03009
]
F9282_03815 (rlmD)
Enzymes [BR:
pcib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
F9282_03815 (rlmD)
Ribosome biogenesis [BR:
pcib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F9282_03815 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
DOT1
MTS
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Methyltransf_23
PrmA
Methyltransf_4
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
QGW02168
LinkDB
All DBs
Position
833945..835270
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AA seq
441 aa
AA seq
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MVQFYSPKKRPVKKQATTLEVTASALDANGQGIAHAEGKTIFVKGLLPQETARIRLTEEK
RQFAKGEVIKRLTTSEQRITPHCEYYERCGGCQQQHVPIALQRTTKAGVLSHLIKRETGV
VISAEPVISGAEYGYRRRARLGLRYQPEKGLVMGFRQERSNDLVMIKKCPVLKSQLNDLL
SPLWECLKQLTSVRDLGHVEMVLADNGPLVILRHLSPLPESDKQSLRDFSQTHQVTMYLA
GDNSEIARLTSIEKEPFYQIEGLNLRFAPTDFIQVNDEINPKMVAQAIEWLDLSPEDRVL
DLFCGMGNFTLPIAKRVSEVVGIEGVPALVEMAKKNAELNQLGNAHFWHTDLSADFSAMS
WSKEGFNKVLLDPARAGALEVMSHIVKLSAEKIVYVSCNPTTLARDSKILLDSGYQLAGL
KMLDMFPQTGHLESMALFSRK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagttttattctcctaaaaaacgccctgtgaaaaaacaggcgacaactctggaa
gtgaccgccagtgcattggatgcaaatggtcaaggtattgctcatgctgagggcaaaacg
atttttgtaaaaggattactcccacaagaaactgctcgtattcgtttaacagaagaaaag
cgccagtttgctaaaggcgaggttattaagcgtttaactactagtgagcagcgtataacg
cctcattgtgaatattatgagcgttgtggtggttgtcagcagcaacatgtgccgattgcg
ttacaacgtacaacaaaagcgggtgtgttatcacatcttattaaacgtgaaacgggtgtg
gtgatttcggcggaacctgttatttccggcgctgaatatggttatcgtcgtagagcaaga
ttgggattgcgttatcaacctgaaaaagggttggtgatgggctttcgccaagagcgctct
aatgatttggtcatgataaaaaaatgcccagtattaaaatcacagttaaatgatttattg
tctcctctttgggaatgtcttaaacaattaacatcagtacgtgatttagggcatgttgaa
atggtgctcgctgataatgggccgttggtgattttacgtcatctatcaccattacctgag
agtgataaacagagtttgcgtgatttctctcaaactcatcaagttacgatgtatcttgca
ggtgataatagcgagatagcacgattaacttcaattgagaaggaacccttctatcaaata
gaaggtctaaatttacgttttgcacctactgattttattcaagtaaacgatgaaataaat
cctaagatggttgcacaagctattgaatggcttgatttatcgccagaagatcgcgtgtta
gatctgttttgtggtatgggaaactttactttacctatcgcaaaacgtgtcagtgaagtg
gtgggcatcgaaggtgtacctgcgctggttgaaatggcgaaaaagaatgcagaactaaac
caactaggtaatgcgcatttttggcatacagatttatcagctgatttctctgcgatgtcg
tggtcgaaagaaggttttaacaaagtgttgttagatcccgcaagagcaggcgctttggag
gtaatgtcacatattgtgaagttatccgcagaaaaaattgtgtatgtctcctgtaatccg
accacgttagccagagatagtaagatattattagattctggatatcagctagccggttta
aaaatgttggatatgtttccacaaacgggtcatctggaatcaatggcactgtttagtcga
aagtaa
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