Proteus terrae subsp. cibarius: F9282_07095
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Entry
F9282_07095 CDS
T06330
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pcib
Proteus terrae subsp. cibarius
Pathway
pcib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F9282_07095 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcib03400
]
F9282_07095 (sbcB)
Enzymes [BR:
pcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
F9282_07095 (sbcB)
DNA repair and recombination proteins [BR:
pcib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F9282_07095 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F9282_07095 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F9282_07095 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGW02760
LinkDB
All DBs
Position
complement(1516679..1518109)
Genome browser
AA seq
476 aa
AA seq
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MTNTTKQPTFYIHDYETFGTNPALDRPAQFAGIRTDMDFNIIEDPLVIYCKPNDDYLPHP
EAVMITGITPQVAAKNGLVEAEFTRQIHQAFSQPNSCIMGYNNLRFDDEVTRNILYRNFY
DPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENEDGFPSFRLELLTKANGISHENAH
DAMSDVYATIAMAKKLKQAQPRMFDYFFNLRDKRKVQALIDIPAMTPIVHVSGMFGAARS
NLSLVAPLAWHPDNRNAVIVCDLAADISPLLTLDSDQLRERLYTPRSELSADEPPVPIKL
LHINKCPIVAPQNTLRQQDADRIGLDVDACLKNQAILFSHPDIRNKVVEIFAQQTPFAVS
DNVDSQIYNGFFSENDRSAMEIIRSTQPQNLPALDLTFEDARMEPLFFRYRARNYPSTLD
YDEQQRWLAHRKEMLTPEKLTEYVNTIQLLAEEHADNEEKLKQLQELYLYAQEIAS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgactaacacaaccaaacaaccaacgttctatatccatgactacgaaaccttcggcact
aatcctgccctagatcgcccagctcaatttgcaggtataagaactgatatggatttcaat
attattgaagatcctctcgttatttattgcaaacctaatgatgattatctacctcatcca
gaagccgtgatgatcacgggaataacaccacaagttgcggcaaaaaatgggttggttgaa
gcagagtttactcgccagatccatcaagcgtttagccaacctaatagttgtattatgggt
tataacaaccttcgttttgatgatgaagttactcgtaatattctttatcgcaatttttat
gatccttatgcttatagctggcaaaaaggaaattcgcgttgggatttacttgatgtttta
cgtgcctgttatgcattgcgccctgaaggtattatttggcctgaaaatgaagacggtttt
ccaagttttcgtttagagttattaactaaagccaatggtatttctcatgaaaatgcccat
gatgcaatgtctgatgtttatgccaccattgcgatggcaaaaaaattaaaacaagcgcaa
ccgcgtatgtttgattatttttttaatttacgtgataaacgtaaagttcaggcactcatt
gatattccagcaatgacaccgattgtgcatgtttcaggtatgtttggtgccgcacgttct
aatttaagtcttgttgccccattagcgtggcatcctgataatcgtaatgcagttattgtg
tgtgacttagccgcagatatatctcctctattaaccctcgactcagaccaattacgtgag
cgcttatatacaccacgtagtgaattatcagctgatgagccacctgttccaattaaattg
ttacatattaataaatgcccaattgtcgcaccgcaaaatacattaagacagcaagatgca
gatagaattggtttagatgttgatgcctgtttaaaaaaccaagcgatcttgttttctcat
cctgatatacgcaataaagtcgtggaaatatttgcacagcaaacaccttttgctgtatcc
gataatgttgactcacagatttataatgggtttttcagtgaaaatgatcgtagtgcgatg
gagattattcgctcaacacaaccacagaatttaccagctttagatttaacgtttgaagat
gcgagaatggaacctctatttttccgttatcgtgcaagaaattatccttcaacacttgat
tatgatgaacaacaacgttggttggctcatagaaaagagatgttaacgccagaaaaacta
accgaatatgttaatactattcagttattagctgaagaacacgctgataacgaggaaaaa
ttaaaacagctacaagagctttatttatatgctcaagagattgcgagttaa
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