Proteus terrae subsp. cibarius: F9282_08905
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Entry
F9282_08905 CDS
T06330
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcib03032
]
F9282_08905 (topA)
03400 DNA repair and recombination proteins [BR:
pcib03400
]
F9282_08905 (topA)
Enzymes [BR:
pcib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F9282_08905 (topA)
DNA replication proteins [BR:
pcib03032
]
Prokaryotic type
DNA Topoisomerases
F9282_08905 (topA)
DNA repair and recombination proteins [BR:
pcib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F9282_08905 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Toprim_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QGW03096
LinkDB
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Position
1838237..1840834
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPKSGSGSQKSENSSATKGVKKVK
KDEKSALVSRMGVDPYNGWNANYQILPGKEKVVAELKALAEKADHVYLATDLDREGEAIA
WHLREVIGGDDERFSRVVFNEITKNAITQAFQTPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLLVEREREIKAFVPEEYWQLHASLLTPDEQPLRMEVTH
YNDKAFNPVSSDETQVAVKALQNATFTVKDREDRPTSSKPSAPLITSTLQQAASTRLSFG
VKKTMMLAQRLYEAGYITYMRTDSTNLSQDAIQMARDYINENFGAKYLPKEPNVYSSKEN
SQEAHEAIRPSDINVIAESLKDMDNDAKRLYQLIWNQFVACQMTPAKYDSTTLTVESGDY
KLRAKGRTLRFAGWTKVMPAMRNKDEDKTLPAVDVGAKLALAELEPTQHFTKPPARFSEA
TLVKELEKRGIGRPSTYASIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEENFSDLMNY
DFTAQMEDHLDHVANNEENWKAVLDAFFTDFSQQLEIAEKDPEEGGMRPNPMVITSIECP
TCSRHMGIRTATTGVFLGCSGYALPPKERCKQTINLIPEDELLNILEGEDAETNALRARR
RCPKCGTAMDSYLIDTHRKLHVCGNNPACDGYEVEEGEFRLKGYEGPVIECDKCGSEMHL
KMGRFGKYMGCTNDDCKNTRKILKSGEIAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPKVEELVRFKDRLAEKMRYLAEAPVADPEGNPTIVRFSRKTKQQYV
SSEKDGKATGWSAFYVDGKWVEKTK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgttatcgtggagtccccggctaaagccaaaacaatcaataaatat
cttggcaatgactacgtagttaaatctagcgtgggtcacattcgtgatttgccaaagagt
ggttctggcagccagaagagcgaaaactcatccgccacgaaaggcgtgaaaaaagttaaa
aaggatgagaaatcagccttagtcagccgtatgggagttgatccctataacggatggaat
gcgaattatcaaattctacccggtaaagaaaaagtagtggctgaactaaaagcattggct
gagaaagctgatcatgtctatctcgcaacggaccttgaccgcgaaggagaagctatcgcg
tggcatttacgcgaagttatcggcggtgatgatgaacgatttagtcgagtggtttttaac
gaaatcactaaaaatgccattacacaagctttccaaactccgggtgagttaaatatagat
cgcgttaacgcgcaacaagcacgtcgctttatggatcgtgttgtgggctatatggtttca
cctttactttggaaaaaagtggctcgtggattatctgcgggtcgagtgcaatcagttgcc
gtgcgtcttttagttgaacgtgagcgtgaaattaaagcctttgttcccgaagaatattgg
caattacacgcgtcactgttaacgcctgatgaacagccattgcgtatggaagtcacgcat
tataatgataaagccttcaaccctgtttcatctgatgaaacacaggttgcggttaaagca
ttacagaatgcgaccttcacggtaaaagatcgtgaagatagaccaacatccagcaagcca
agcgcaccacttatcacatcaaccttacagcaagcggcaagtacgcgcttaagctttggt
gtgaaaaagacgatgatgctagctcagcgcctttatgaagcaggttatataacctatatg
cgtactgactcaactaacttaagtcaggatgcaattcaaatggcgcgtgattatatcaat
gagaattttggcgctaagtatttgccgaaagagccaaacgtttattcgagcaaagaaaat
tctcaagaagcgcacgaagctatccgtccttcagatatcaacgttatcgcagaatcttta
aaagatatggataacgatgccaaacgtttatatcaactgatttggaatcaatttgttgct
tgccaaatgacaccggcaaaatacgattcgaccacattaacagtcgaatcaggtgattat
aaactacgtgctaaaggtcggactttacgttttgcaggttggacgaaagtcatgccagcg
atgcgtaataaagatgaagataaaaccttaccagccgttgatgtaggggcaaaactagct
ttagctgaattagaacctactcagcactttactaagccaccagctcgttttagcgaagcg
acgttagttaaagaattagaaaaacgcggtatcggccgtccatcaacatatgcatctatc
atctccaccattcaagatcgtggttatgtgaaagttgaaaaccgtcgtttttatgcagaa
aaaatgggtgaaattgtaaccgatcgcttagaagagaattttagcgatttaatgaattat
gattttactgcgcaaatggaagatcacctcgaccatgttgctaataatgaagaaaactgg
aaagcggtattagatgcgttcttcaccgattttagtcagcaattagaaattgctgaaaaa
gatcctgaagaaggcggaatgcgaccaaatccaatggttattacgtcgattgaatgtcca
acctgttctcgtcatatgggaattagaacggcgacaacaggcgtattcttaggatgttca
ggctatgctttaccgcctaaagagcgttgtaagcaaaccattaaccttatccctgaagat
gaattattaaatattcttgaaggggaagatgcagaaaccaatgcattacgtgctcgtcgt
cgttgcccgaaatgtggtactgcaatggacagttacctgattgatactcatcgtaaatta
catgtttgtggtaataatcctgcatgtgatggttatgaagttgaagaaggtgagttccgc
ttaaaaggttatgaaggtccagttattgagtgcgataaatgtggatctgaaatgcacctg
aaaatggggcgttttggtaaatacatgggctgtactaatgatgattgtaaaaatacccgt
aagatcttaaaaagcggtgaaattgcaccaccaaaggaagatcccgttccgcttcctgag
ttgccatgtgaaaaatcagatgcttactttgtcttacgagacggtgctgcgggcgtcttc
ttggctgcaaacacgttccctaaatcaagagaaacgcgtgcaccaaaagtagaagaactg
gttcgctttaaagaccgtttagcagagaaaatgcgttatttagcagaagcgccggtggct
gatcctgaaggaaacccaacgattgtgcgttttagccgtaaaacaaaacagcaatatgtt
tcttcagagaaagatggcaaagcaacaggctggtctgcgttttatgtcgatggtaaatgg
gttgaaaaaaccaaataa
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