Proteus terrae subsp. cibarius: F9282_09975
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Entry
F9282_09975 CDS
T06330
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcib03016
]
F9282_09975
Enzymes [BR:
pcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F9282_09975
Transfer RNA biogenesis [BR:
pcib03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F9282_09975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGW03292
LinkDB
All DBs
Position
complement(2076771..2077889)
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AA seq
372 aa
AA seq
DB search
MNYQLITTDTALDSACKAASEASQIALDTEFVRIRTYYPHLGLIQMYDGKQISLIDPLAI
KNWAPFIELLTNPGIMKFLHAGSEDLEVFSHQFGCVPTPMIDTQVVAAFLGHPISCGFAT
LVEKYENVALDKSESRTDWLARPLTEKQCQYASGDVFYLLPLAEKLIEEAEEAGYMDAIA
DECKMIAERRQETVVPELAYRDISNAWQLKDQQLACLQMLAQWRLNQAKARDMALNFVVR
EEHLWSVARYLPSSLAELDALSLSGQEIRCHGRRLLDFVVKAKEVKDEDCPEPIGNLIEQ
PNYKKAFKAIKAVIQEISEDKRYNPELLASRRQINQLLSIHWKIKEGQPELTSRWRKALL
EEKVTEILAQYP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaattgattacgacagacactgcactagattccgcctgtaaagctgcttca
gaggcttcacaaattgctttagatacagagtttgtccgcatacgtacctattaccctcat
cttggtttgatccagatgtatgacggtaaacagatctctcttattgacccgttagcaatt
aagaattgggctcctttcattgagctattaacaaacccgggcatcatgaagtttctccat
gctggaagtgaagatctcgaagttttttctcaccagtttggttgtgttccaacaccgatg
attgatactcaagtagtcgctgcatttttaggccatcctatctcttgtggtttcgcgaca
ttagttgagaaatatgaaaatgttgcactagataaaagtgaatcccgaacagactggtta
gcgcgccctttaactgaaaaacagtgccaatatgctagtggtgatgttttctacttacta
cctttagctgaaaaattaattgaagaagctgaagaagcaggctatatggatgcgatcgca
gatgaatgcaaaatgattgcagagcgtcgacaagaaacggttgtaccagagctcgcctat
cgtgatattagcaatgcatggcaattaaaagaccaacagttagcatgtttacaaatgctt
gctcagtggcgcttaaatcaagctaaagctcgagatatggcattaaactttgttgtaaga
gaagaacacttatggtctgttgctcgttaccttccatcctcattagcagaactcgatgca
ttatcgctttcaggtcaagaaattcgttgtcatggtcgtcgtttattagattttgttgtt
aaagctaaagaagttaaagatgaagattgcccagagcctattggtaatttaattgaacaa
ccaaactataaaaaagcatttaaagcgattaaagcagttattcaagaaattagtgaagat
aagcgctacaaccctgaactgttagcctcaagaaggcagattaatcagctattaagtatt
cattggaaaataaaagaagggcaacctgaattaacttcacgttggcgtaaagcattatta
gaagaaaaagtgacagaaattctggcgcaatatccatag
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