Proteus terrae subsp. cibarius: F9282_15525
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Entry
F9282_15525 CDS
T06330
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcib03021
]
F9282_15525 (rapA)
Transcription machinery [BR:
pcib03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F9282_15525 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Bac_DnaA
COG2_N
Motif
Other DBs
NCBI-ProteinID:
QGW04309
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Position
3285948..3288851
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AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPACGENRLYSRHDAPITRVMFNAGDT
VTSHEGWKLAIDNVVEDNGLLIYHGVRLDTEEPAQLREVFLDNKLTFNKPQDRLFAGQID
RMDRFALRYRARKFMSEQFKQAQSGLRGIRASLIPHQLYIANEVGKRHNPRVLLADEVGL
GKTIEAGMIIHQQLMDGRAERVLIIVPESLQHQWLVEMLRRFNLRFSLFDDSRYSESLLD
SDNPFETEQMIICSLDFVRKNKQRFEHLVEATWDMLVVDEAHHLVWSEDAPSREYQVIEE
LAESIPSVLLLTATPEQLGQESHFARLRLLDPSRFHDYNEFINEQQKYRPVADAVTILLS
EDDLNTEQQNIISEMISEQDVEPLLKAANTQGEERTKSRQELIHMLMDRHGTGRLLFRNT
RSGVKGFPNRLLHAIKMPLPTQYQTAIKVAEIMAAKKSLEVRAKEMLYPERIYQEFEGEN
ATWWNFDPRVEWLLGFLTANRNEKVLVICAQAATALQLEQVLREREGIRAAVFHEGMSLL
ERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIG
QNRDIDISIPYLEGTAQSVLLRWYHEGLDAFEHTCPTGRTIYDSKYDALVNYLAQPNELA
DFDDFIVACRKQHDEMKLKLEQGRDRLLEMHSNGGEVGVELAGEIAAQDNDPELVNFALN
LFDIVGINQEDRSDSLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWEH
PIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKHLHLSRFLPATPV
RLLLDLKGNNLASQVEFESFNRQLNAVNRHTSSKLVNAVQSEVHHVLKTSEPLMEVEAKG
LIQKAKEEADRVLTHELSRLEALRAVNPNIRDDEVEAIENERAHILNHLDEATWRLDSIR
LIVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgttggattagcgatactgaaagcgagcttggactgggt
actgttgtggcagttgatgcccgcatggtcaccttactttttcctgcctgtggcgaaaac
cgcctttattcccgtcatgatgcaccaataacgcgggtgatgttcaatgcaggagatact
gtcaccagtcatgaaggctggaagctcgctatcgataacgttgtagaagataacggccta
cttatctaccatggtgtacgtttagacactgaagagccagcacaattacgtgaagtgttc
ttagataacaaactcacttttaataaaccgcaagatcgcctctttgcaggtcaaatcgac
cgtatggatcgctttgcattacgctaccgcgcacgtaagtttatgagcgagcagtttaag
caagcacaaagtggtttacgtgggatccgcgcaagccttatccctcatcagctttatatc
gccaatgaagtgggtaaacgtcataaccctcgcgtattattagctgatgaagttggttta
ggtaaaacaattgaagccggtatgattatccaccagcaattaatggatggtcgtgctgag
cgtgtgttgattattgtgcctgaaagcttacaacatcagtggttagttgaaatgttacgc
cgtttcaatctacgtttctcactgtttgatgatagccgttatagcgaatctttattagat
agcgataatccatttgaaacagaacagatgatcatctgttctttagattttgtgcgtaaa
aacaagcaacgttttgaacacttagtcgaagcaacatgggatatgttagttgtcgatgaa
gctcatcaccttgtttggagtgaagatgcgccaagccgtgaatatcaagtaattgaagag
ttagcggaatctattccctctgtattgctattaactgcaaccccagagcagttaggtcaa
gaaagccacttcgcacgtttacgtctgcttgacccaagtcgtttccatgactacaacgaa
tttattaatgagcaacaaaaatatcgccctgttgccgatgctgtcactattttgctatca
gaagatgatttaaataccgaacaacaaaatatcatcagcgaaatgatcagcgagcaagat
gttgagccattactgaaagcggcaaatacgcaaggtgaagaacgtactaaatctcgccaa
gaacttatccatatgttaatggacagacatggaacgggtcgtttgttattccgtaacaca
cgttctggtgttaaaggtttccctaatcgcttacttcatgcgatcaaaatgccactgccg
acacaatatcaaactgcaattaaagtagctgagattatggcagccaaaaagagtctcgaa
gttcgtgcaaaagagatgctctatcctgaacgtatttaccaagaatttgaaggtgaaaac
gcaacatggtggaacttcgacccgcgtgttgaatggttactaggtttcttaactgcaaat
cgtaatgaaaaagtactagtaatttgtgctcaagctgcaacagcgctgcaattagagcaa
gttttacgtgagcgtgaaggtattcgtgcagcagtcttccacgaaggtatgtcattactt
gaacgcgatcgcgctgcagcttattttgcttctgaagaagaaggcgcacaagttctgcta
tgttcagaaatcggctctgaaggacgtaacttccagtttgctaatcaactggttatgttt
gatctgccatttaaccctgatttactcgaacaacgtattggtcgtctcgatcgtattggt
caaaaccgcgatattgatattagcattccttatcttgaaggtacggctcaatctgtatta
ttacgctggtatcatgaaggcttagatgcctttgagcatacttgtccgactggccgtact
atttacgacagcaaatatgatgctctcgttaattaccttgcacagcctaatgagttagct
gattttgatgactttattgtcgcttgtcgtaaacagcatgatgaaatgaagctcaaactt
gagcaaggccgtgaccgcctattagaaatgcactctaacggtggtgaagtcggtgttgag
ttagcgggtgaaattgcagcacaagataacgatcctgaattagtgaactttgcactgaac
ttatttgatatcgttggtattaatcaagaagatcgtagtgatagcttgattattttaacg
ccatctgatcatatgttagtgcccgatttccctggattaccacaagatggttgcactatc
acatttgatagagagcaagcgctatctcgtgaagatacccaatttatcagttgggaacac
cctattatccgtaatggcttagatttgattttatctggcgatacaggaagttgtgccgtt
tctttattaaaaaataaagcattgccagtgggaacattgttagttgaattgatttatgtc
gtagaagcgcaagcgcctaagcatcttcatttaagtcgtttcttacctgcaacaccggtg
cgcttattacttgatctaaaaggtaataatcttgcatctcaagttgagtttgaaagcttt
aaccgtcaattaaatgctgttaatcgtcatacttctagcaaattagtcaatgcagtacaa
agtgaagtccaccatgtactgaaaacgtctgaacctttaatggaagtcgaagcgaaagga
cttatccaaaaagcgaaagaagaagcagatcgcgtgctaactcatgaattatcacgctta
gaagctttacgtgcagtaaacccaaatattcgtgatgatgaagtcgaagcaattgaaaat
gaacgtgctcatattcttaatcatttagatgaagcaacgtggcgtttagactcaattcgc
ttaattgtcgttacccaccaataa
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