Pseudomonas cimarronensis: ACOCLD_02350
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Entry
ACOCLD_02350 CDS
T11824
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03030
DNA replication
pcim03410
Base excision repair
pcim03420
Nucleotide excision repair
pcim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOCLD_02350 (polA)
03410 Base excision repair
ACOCLD_02350 (polA)
03420 Nucleotide excision repair
ACOCLD_02350 (polA)
03440 Homologous recombination
ACOCLD_02350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcim03032
]
ACOCLD_02350 (polA)
03400 DNA repair and recombination proteins [BR:
pcim03400
]
ACOCLD_02350 (polA)
Enzymes [BR:
pcim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOCLD_02350 (polA)
DNA replication proteins [BR:
pcim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACOCLD_02350 (polA)
DNA repair and recombination proteins [BR:
pcim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACOCLD_02350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACOCLD_02350 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
XQW31769
LinkDB
All DBs
Position
complement(496978..499824)
Genome browser
AA seq
948 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPKSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDELRVQVEPLHASVRAMGYPLLCVEGVEADDVIGTLAR
QCAAEGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIDGVKAKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLVGVGGGLDVLYANLDKVAELPIRGAKTLPAKLAEHKDM
AYLSYALATIKLDVPLNIAIDSLHPGEMDVPALMELYAELEFKTWRDELLRSNPAPAVKA
PIAAPADDLFALAPSASAVAVAAPTAAAAAVETAVAEQPAPAALGDYVCILEQSQFDEWL
EKLRKAELIAFDTETTGLDAQQAQLVGLSFAVKAGEAAYIPVAHSYMGVPSQLDRDAVLK
ALKPILEDPSKAKVGQHAKYDINILANASTPIAVQGVAFDTMLESYVLDSTATRHDMDSL
ALKYLDHSNIRFEDIAGKGAKQLTFDQIDLAQAAPYAAEDADVTLRLHQHLWAKLDAEPS
LAKVLHEIEMPLVPVLARIERQGALVDANLLGLQSNELGEKLVALERQAFEIAGEEFNLA
SPKQLGVILYEKLGLPVLSKTAKGQASTAEAVLAELAEQDFELPKVLIQYRSLSKLKSTY
TDRLPEQINPRTGRIHTSYHQAVAATGRLSSTDPNLQNIPIRTAEGRRIRQAFVAPKGYK
LLAADYSQIELRIMAHLAKDESLLEAFRHGRDVHKATAAEVFGVPLEEVTSDQRRSAKAI
NFGLIYGMSAFGLAKQIGCDRKQAQAYIDVYFARYPGVLAYMERTREQASEQGFVETLFG
RRLYLPDIHAKNQALRKGAERTAINAPMQGTAADIIKRAMVRVDNWLSESGLDAKVILQV
HDELVLEVREDLVAQVSEQIKPLMGDAAALDVPLLVEVGVGDNWDEAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccctctcgttctggttgacggttcgtcttacctttaccgtgccttccac
gccctgccgccgctgaccacctccaagggcttgcccaccggtgcggtgaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtacccgaaaagcccgtttgccgtggtgttcgac
gccaagggcgggaccttccgtgatgaaatgttcgccgagtacaaggccaatcgcccgtcc
atgcccgacgagctgcgtgtgcaggtcgagccgctgcacgccagcgtcagggccatgggc
tacccgctgctgtgcgtcgagggcgtcgaggccgatgacgtgatcggcaccctggcccgc
cagtgcgctgccgagggccgtgacgtggtgatctccaccggtgacaaggacatggcgcag
ctggtttgcccgcacgttacgctggtcaacaccatgaccggtagcgtctacgacatcgat
ggcgtgaaagcgaaattcggtgtcggtcctgagctgatcatcgactacctggcgctgatg
ggtgacaaggtcgacaacattcccggcgtgccgggcgtgggcgaaaagaccgcgctgggc
ctgctggttggggtcggtggtggcctcgatgtgctctacgccaatctcgacaaggtggcg
gaactgccgattcgtggggccaagaccctgccggccaaactcgccgagcacaaggatatg
gcctacctgtcctacgcgctggcgaccatcaaactggatgtgccgctgaatatcgctatc
gactcgctgcacccgggcgagatggatgtgccggccctgatggagctgtacgccgagctg
gagttcaagacctggcgcgatgagttgctgcgcagcaacccggccccggcggttaaggcc
ccgatcgcagcgcccgccgatgacctgtttgctctggcgcccagcgccagtgccgttgct
gtcgcagcaccgaccgctgcagcggcggcagtcgaaacggccgttgccgaacagcccgcg
ccggccgccttgggtgactatgtgtgcatcctggaacagtcgcagttcgacgagtggctg
gagaagctgcgcaaggccgagctgatcgccttcgacaccgaaaccactggcctggatgcg
caacaggcgcagctggtcggcctgtcgtttgcggtcaaggccggcgaagcggcgtatatc
ccggtggctcacagctatatgggcgtgccgagtcagctcgatcgcgatgcagtgctcaag
gcgttgaagccgattctcgaagacccaagcaaggccaaggtcggccagcacgccaagtac
gacatcaacatcctcgccaatgcctcgacacccatcgcggtgcagggtgtggcgttcgac
accatgcttgagtcctacgtgctggattccaccgccacccgtcatgatatggacagcctg
gcactcaaatacctggatcacagcaatatccgcttcgaggacatcgccggcaaaggcgcc
aagcagctgaccttcgaccagattgatcttgcccaggccgcgccttatgccgctgaagat
gctgacgtaaccctgcgtctgcaccagcatttgtgggccaagctcgacgctgagccgagc
ctggccaaggtgctgcatgagatcgagatgccgctggtgccggtactggcgcgtatcgaa
cgccagggcgcgctggtggatgccaacttgctgggtctgcaaagcaacgagctgggtgaa
aagctggtggcgctggaacgtcaggccttcgagattgccggcgaagaattcaatctggct
tcgcccaagcagctgggcgtgattctctacgaaaaactgggcttgccggtgcttagcaag
accgccaagggtcaggcctccacggctgaagcggtgctggccgaactggccgaacaggac
ttcgaactgcccaaggtgctgatacagtaccgctccttgagcaaactgaaaagcacctac
accgaccgcctgccagagcagatcaacccgcgcaccgggcgcatccacaccagctatcac
caggcggtggcggccaccgggcgtctgtcgtccaccgatccgaacctgcagaacatcccg
atccgcaccgctgaaggtcgacgtattcgccaggcctttgtcgcgcccaagggttacaaa
ctgctggcggcggactattcgcagatcgagctgcgcatcatggcccacctggccaaggat
gaaagcctgctggaagccttccgccatggccgtgatgtacacaaggccactgcggccgag
gtgttcggtgtgcctttggaagaggtcaccagtgatcagcgccgcagtgccaaggcgatc
aacttcggcctgatctatggcatgagcgccttcggcctggccaagcagatcggctgcgac
cgcaagcaggcgcaggcctatatcgatgtgtatttcgcccgttaccccggtgtgctggcc
tatatggagcgcacccgcgagcaggcgtccgagcagggctttgtcgagacgctgttcggt
cgccggctgtacctgccggatatccacgcgaagaatcaggcactgcgcaaaggcgccgag
cgcaccgcgatcaacgcgccgatgcagggcacggcagcggacatcatcaagcgtgccatg
gtccgggtcgacaactggctgagtgagtccggtctggatgccaaggtcatcctgcaggta
cacgacgaactggtgctggaagtgcgtgaggatctggtcgcgcaggtcagtgagcagatc
aagccgctgatgggcgatgctgccgcgctggatgtgccgctgctggtggaggttggcgtg
ggtgataactgggatgaggcgcactga
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integrated database retrieval system
