Pseudomonas cimarronensis: ACOCLD_02890
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Entry
ACOCLD_02890 CDS
T11824
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACOCLD_02890 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcim03400
]
ACOCLD_02890 (recF)
DNA repair and recombination proteins [BR:
pcim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACOCLD_02890 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
Aq_aa27
ABC_tran
AAA_13
NACHT
AAA_27
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
XQW31870
LinkDB
All DBs
Position
complement(609291..610394)
Genome browser
AA seq
367 aa
AA seq
DB search
MSLTRFTVTAVRNLHPVTLSPSPRINILSGANGSGKTSLLEAIHLLGLARSFRSTRLLPV
IQYDQLACTIFGQVQLCDGRQSSLGISRDRQGEFQIRIDGQNARSAAQLAETLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDAASQAAWD
RELCLASDEIDGYRRAYIQALKPVFERTLNELVELEGLTLSYYRGWDKERELNTVLASTL
SRDQQLGHTQAGPQRADLRLRLGAHNAAEILSRGQQKLVVCALRIAQGHLVNQAKHGQCI
YLVDDLPSELDEQHRRALCRLLEDLHCQVFITCVDHELLREGWRTDTPVAMFHVEHGGIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttactcgctttaccgtcaccgcggtgcgtaacctgcacccggtgaccctctcc
ccctccccgcgtatcaatatcctctccggtgccaacggcagcggtaaaaccagcctgctc
gaagccattcacctgttggggttggcccgttcgtttcgcagcacacgcttgcttccggtt
attcagtacgatcagcttgcctgcacaattttcggtcaggtgcagctgtgcgatggtcga
caaagcagtttgggaatttcgcgggatcgccagggcgagtttcagattcgtatcgatggg
caaaatgcgcgcagcgctgcgcagcttgctgagacgctgccgctgcagttgatcaatccg
gatagtttccgtttgctcgaaggtgcaccgaagattcgtaggcagtttctcgactgggga
gtgttccacgtggaacctcgttttctcccagcctggcagcgcctgcagaaggcccttcgt
cagcggaactcatggctgcggcatggtacacttgacgccgcttcacaagcggcctgggac
cgagagttatgcctggctagcgacgaaattgacggttatcgacgcgcctatattcaggcc
ttgaaaccggttttcgagcgtaccctgaacgagttggttgagctggaggggctgaccctc
agctactaccgcgggtgggataaagagcgtgagttgaacacagtactcgcctctaccctc
tcccgtgatcagcaactgggccatacccaggcagggccccaacgtgctgatctcaggttg
cgtttgggagcgcacaatgccgccgagatactttcgcgcgggcagcagaagttggttgta
tgtgccctgcgcattgcccaggggcatttagttaatcaggccaagcacggccaatgcatt
tatctggtggatgacttgccgtcagaactggatgagcagcaccgtcgtgcgttgtgtcga
ttgttggaagacttgcactgccaggtgtttatcacctgtgtagaccatgaattgttgagg
gaaggctggcgcacggatacgccagttgccatgttccacgtggaacatggtggcatcacc
cagacccacgaccaccgggagtga
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