Pseudomonas cimarronensis: ACOCLD_03320
Help
Entry
ACOCLD_03320 CDS
T11824
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03420
Nucleotide excision repair
pcim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACOCLD_03320 (uvrD)
03430 Mismatch repair
ACOCLD_03320 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcim03400
]
ACOCLD_03320 (uvrD)
Enzymes [BR:
pcim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACOCLD_03320 (uvrD)
DNA repair and recombination proteins [BR:
pcim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACOCLD_03320 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACOCLD_03320 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XQW31956
LinkDB
All DBs
Position
complement(693250..695454)
Genome browser
AA seq
734 aa
AA seq
DB search
MQNDPELLIASLNDAQRQAVAARVGRQLVLAGAGSGKTRVLVHRIAWLIQIENASPHSIL
SVTFTNKAAAEMRHRIEQMLGQSPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRIVKRVIRDLGLDEQRWPPKQAQWFINGQKDEGLRPKNIQPGGDLFLATMLKIYEAYE
AACARAGVIDFSELLLRALDLWRDKPGLLEHYQRRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIQQFSDDFSDAEVIRLEQNYRSTAGILKAANALIA
NNQGRLGKELWTEDGDGEPINLYSAFNEHDEARYVVESIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERIINVPARG
IGEKSIEAIREYARAHQVSMWGAMHLMVSAKALPARASGALVGFIELINNLAAKVLDMPL
HLMTQTVIEQSGLIAYHQAEKGEKAQARIENLEELVSAARTFDNNEDDELSPLQAFLTHA
SLEAGDTQAAENEDSVQLMTLHSAKGLEFPQVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMSKLVITYAETRRLYGNETYNKVSRFVREIPPQLIQEVRLSNSVSRPFGAVS
RNMGGNSMSGDSLFAGSAVPDTGFSLGQRVQHSLFGEGTILNFEGSGAQARVQVNFESEG
SKWLMLSYAKLQAL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgaccccgaactcctgattgcctctcttaacgatgcccagcgccaggccgtc
gccgcgcgcgtgggccgccaactggtgctggccggtgctggctccggaaaaacccgcgtg
ctggtgcaccgcatcgcctggttgatccagatcgagaatgcatcgccgcacagcattctg
tcggtgacctttaccaacaaggctgctgccgaaatgcgccaccgcatcgagcagatgctc
gggcagagcccggccggcatgtgggtaggcaccttccacggcctggcccaccgcctgctg
cgcgcgcactggcaggaagccggcctggccgagaacttccagattctcgactccgacgat
cagcaacgcatcgtcaaacgggtgatccgcgacctcggcctggatgaacagcgctggccg
ccgaagcaggcgcagtggtttatcaacgggcaaaaggatgaaggcctgcggccaaagaac
atccagcccggcggtgacctgttcctcgccaccatgctgaagatctacgaagcctacgaa
gccgcctgcgcccgcgccggagtcatcgacttctccgagctgctgctgcgcgccctcgat
ttgtggcgagacaaaccgggcctgctggagcattaccaacggcgcttccggcatatcctg
gtcgacgaattccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgccaag
ggtggcgacagcctgatggtggtgggcgatgacgaccagtcgatctacggctggcgcggg
gcgaagatcgagaacatccagcagttctccgacgatttcagcgatgccgaagtgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgcgttgatcgcc
aataaccagggacgcctgggcaaggaactgtggaccgaagacggcgacggcgagccgatc
aacctgtattcggcgttcaacgagcacgacgaagcacgctatgtggtcgagtcgatcgag
gacgccctgcgcaaggacggcctcaaacgcagtgaaatcgccattctctatcgctccaac
gcccagtcgcgggtgctggaagaagccctgctgcgcgagaagatcccctaccgcatctac
ggcggccagcgcttctttgaacgcgcggaaatcaagaacgccatggcctacctgcgcctg
ctcgacggccggggcaatgacgccgcactggagcgcatcatcaacgtgccggcgcgcggt
atcggtgagaaaagcatcgaagcgatccgcgaatacgcacgcgcccatcaggtatcgatg
tggggcgccatgcacctgatggtcagcgccaaggccctgccggcccgcgcctcgggtgcg
ttggtcgggtttattgagctaatcaacaacctcgcggccaaagtgctggatatgccgctg
cacctgatgactcagaccgtcatcgagcagagcggcctgattgcctatcaccaggccgag
aaaggcgaaaaagcccaggcacgtatcgagaacttggaagaactggtcagtgccgcgcgc
accttcgacaacaacgaagacgacgagctcagcccactacaggccttcctcacacacgcc
tcgctggaggccggcgatacccaggccgccgaaaacgaggacagcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttcccgcaggtgtttctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgcctggaagaggagcgccgcctg
gcctacgtcggtatcacccgcgccatgagcaaactggtgatcacctacgccgaaacccgt
cgtttgtatggcaacgagacctacaacaaggtgtcgcgcttcgtccgcgagattccgccg
cagctgattcaggaagtgcgcctgtccaatagcgtcagccggccgttcggcgcggtcagc
cgcaatatgggcggcaacagcatgagcggcgacagcctgttcgccggcagcgccgtaccc
gacactggcttcagcctcggccagcgcgtacagcattcgctgttcggtgagggcaccatc
ctcaacttcgaaggctccggtgcccaggcgcgggtgcaggtgaatttcgagagcgaaggc
agcaagtggctgatgctcagctacgccaagttgcaggcgctgtaa
DBGET
integrated database retrieval system
