Pseudomonas cimarronensis: ACOCLD_04440
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Entry
ACOCLD_04440 CDS
T11824
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pcim
Pseudomonas cimarronensis
Pathway
pcim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACOCLD_04440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcim02000
]
ACOCLD_04440
Transporters [BR:
pcim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACOCLD_04440
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Penicil_amidase
Motif
Other DBs
NCBI-ProteinID:
XQW32175
LinkDB
All DBs
Position
complement(939499..940731)
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AA seq
410 aa
AA seq
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MSSLTRSEASQASSARNKKRLTAFLFVVPLLVFILLSFVAPIASMLWRSVHHPTVAAMIP
LTLHELQRWDGKATPDQQTLSVFAQELHALAKERQSGKLAEEFNRASAGMSSVVKASARK
LSRLQAEQLEQQGAEILLKSHRNWSKPEIWYAIQRAGKPYTYDYYLTALDLELHPEQGIQ
VREDTQIYLQLYSKTLNMALVITLFCALLGYPLAYYLAGLPENRANLLLVLVLLPFWTSL
LVRTTAWIALLQTNGVINSFLLGIGVIGQPIEMLYTSFATVVAMTHILLPFMILPLYSVM
RGIDPSYLRAALSLGARPIPAFARIYFPMTLPGLSAGALLVFIISVGYYITPALVGGTDG
QMISNIIAFHMQRSNNWELAAALGSLLLGLILLLYWLYDRFVGASNIKLG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctctctgacccgctccgaagccagccaggcctccagtgcacgcaacaagaagcgc
ctcaccgcctttctgttcgtcgtgccgctgctggtgtttatcctgctgtcctttgtcgcc
ccgattgccagcatgctctggcgcagcgtccatcacccgacggtggccgcaatgattccg
ctgaccctgcacgaactgcaacgctgggacggcaaagccacacctgatcaacaaaccctg
agcgtgttcgcccaggaactgcacgcgctggccaaagagcgccagtccggcaaactggcc
gaagagttcaaccgcgcttcggccggcatgtccagcgtggtcaaagccagcgcccgcaag
ctcagccgcctgcaggccgaacaactcgagcagcagggtgctgaaattctgctcaagtcg
caccgcaactggagcaagccggaaatctggtacgccatccagcgggccggcaaaccctat
acctatgattactacctgaccgcactcgacctggagctacaccccgagcaaggcattcag
gtacgcgaagacacacaaatttatctacagctgtacagcaagaccctgaacatggcgctg
gtcatcaccctgttctgtgccctgctcggctacccactggcctactacctggccggcctg
ccggagaaccgcgccaacctgctgctggtgctggtgttgctgccgttctggacctcgctg
ctggtgcgcaccaccgcctggatcgcgctgctgcagaccaacggcgtgatcaactccttt
ctgctcggaatcggcgtgatcggtcaacccatcgagatgctctacacctcgtttgccacc
gtggtggcgatgacccacatcctgctgccgttcatgatcctgccgttgtacagcgtgatg
cgcgggattgaccccagctacctgcgtgccgcgctgtcactgggcgcacggccgattccg
gcctttgcgcgcatctacttcccaatgaccctaccgggcctgagcgccggggcgctactg
gtgttcatcatttccgtgggctactacatcaccccggcgctggtcggcggcaccgacggc
cagatgatcagcaacatcatcgccttccacatgcaacgctcgaacaactgggaactggcc
gccgcgctgggctcgctgctgctcggcctgatcctgctgctgtactggctgtacgaccgc
tttgtcggcgccagcaatatcaaactgggctaa
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