Pseudomonas cimarronensis: ACOCLD_04770
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Entry
ACOCLD_04770 CDS
T11824
Name
(GenBank) DEAD/DEAH box helicase
Organism
pcim Pseudomonas cimarronensis
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Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XQW32239
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Position
complement(1008437..1010275)
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AA seq
612 aa
AA seq
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MSFASLGLSEALVRAVEDAGYTQPTPVQQRAIPAALQGRDLMVAAQTGTGKTGGFALPIL
ERLFPNGHPDREQRHGPKQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN
PQIQALAKGVDVLVACPGRLLDLANQRAIDLSHVEILVLDEADRMLDMGFIHDVKKVLAK
LPAQRQNLLFSATFSKDITDLASKLLHNPERIEVTPPNTTVERIEQRIFRLAASHKRALL
AHLITQGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKANKV
RILVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKAIERMTKQKIPDGDLQGFDASTVEAERPEVREPQKPRQPRGAKPEGERHGGGRKDKGK
DSGRDNSRKPQGSRAQQPRSSARAAAPAVPALPPDRAPDEFRDDDIDNFGNRVDYVSPNQ
NKQQNRGRRPGAPGTNNASGQGARAAKPRNNGGGANSGGQGRRQGGGAQGGQGRNGSGRA
RPPRDTRTTSLNRDELPRQEAAVKSPRDKQPVIMHKGSRLDRFPTPEQLDELASARPRGE
KPALLTRNREES
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcctccctcggtctctccgaggctttagtccgtgcagtagaagatgccggc
tacacccaacccactccggtgcaacagcgggctatccccgccgcgttgcaaggtcgcgac
ctgatggtggcggcccagacgggtacaggtaagacgggcggttttgccctgccgattctc
gagcgactgttccctaacggtcacccggatcgcgaacaacgccacggcccgaaacaaccg
cgcgtactggtgctcacccctacccgcgaactggccgcccaggtgcacgacagcttcaag
ctgtatgcccgcgatttgaaattcgtcagcgcctgcatcttcggcggcgttggcatgaac
ccgcagatccaggccctggccaagggcgtcgacgtgctggtggcctgccccggccgcctg
ctcgacctggccaaccagcgcgccatcgacctctcgcacgtggaaatcctcgtgctcgac
gaagccgaccgcatgctcgacatgggttttatccatgacgtgaaaaaggtcctcgccaag
ctgcccgcacaacggcagaacctgctgttctcggcgaccttctccaaggacatcaccgat
cttgccagcaagttgctgcacaacccggagcgcatcgaagtcacgccgccgaacaccacg
gttgagcgtatcgaacagcgcatcttccgcctggctgccagccacaagcgcgccctgctc
gcccacctgatcacccagggcgcctgggagcaagtgctggtgtttacccgcaccaagcac
ggcgccaaccgcctggccgaatacctcgacaagcacggtctgccagctgtggcgatccac
ggtaacaagagccagaacgcccgcaccaaggcgctggccgacttcaaggcgaacaaggta
cgcattctggtcgccaccgatatcgccgcccgcggcctggatatcgaccagctgccccac
gtggtcaacttcgagttgcccaacgttgaagaagactatgtgcaccgcatcggccgtacc
ggccgtgccggccgtagcggcgaagcgatctccctggttgctccggacgaagagaagctg
ctcaaagccatcgaacggatgaccaagcagaaaatcccggatggcgatttgcagggcttc
gatgccagcaccgttgaggccgagcgtccggaagtgcgcgagccgcagaagccgcgtcaa
ccgcgcggcgccaaaccagaaggcgaacgccacggcggcggacgcaaggacaaaggcaag
gacagcggacgcgataacagccgcaagccgcagggtagccgcgcgcaacaacctcgcagt
tcggcccgcgcagctgcaccggccgtgcctgcgttgcctccggaccgcgcgccggacgag
ttccgcgatgatgacatcgacaacttcggcaaccgtgtcgactacgtcagcccgaaccag
aacaagcagcagaaccgtggccgtcggcccggtgcacccggcaccaacaacgctagcggc
cagggtgcgcgcgcagccaagccgcgtaacaatggtggcggcgccaattccggtggccag
ggccgtcgtcagggcggcggcgctcaaggcggccagggccgtaatggctccggccgtgca
cgcccaccacgcgacacccgcaccacctcgcttaaccgcgatgagctgccacgtcaggaa
gctgcggtgaaaagcccgcgcgacaagcaaccggtgatcatgcacaaaggctcgcgcctg
gaccgcttcccgaccccggagcagctcgacgaactggcgagtgcacgtccgcgcggcgaa
aaaccggccctgctgacgcgcaaccgcgaagagtcatag
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