KEGG   Pseudomonas cimarronensis: ACOCLD_05415
Entry
ACOCLD_05415      CDS       T11824                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pcim  Pseudomonas cimarronensis
Brite
KEGG Orthology (KO) [BR:pcim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcim03032]
    ACOCLD_05415 (parE)
   03036 Chromosome and associated proteins [BR:pcim03036]
    ACOCLD_05415 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcim02048]
    ACOCLD_05415 (parE)
Enzymes [BR:pcim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ACOCLD_05415 (parE)
DNA replication proteins [BR:pcim03032]
 Prokaryotic type
  DNA Topoisomerases
   ACOCLD_05415 (parE)
Chromosome and associated proteins [BR:pcim03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    ACOCLD_05415 (parE)
Prokaryotic defense system [BR:pcim02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    ACOCLD_05415 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: XQW32363
LinkDB
Position
1160610..1162508
AA seq 632 aa
MAQQNTYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSIQVI
LHEDNSLEVLDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISV
VNALSTRVLVTVKRDGNEYQMSFADGFKASDLAVIGTVGKRNTGTSVHFWPDAKYFDSHK
FSVSRLKHVLKAKAVLCPGLAVSFEDKASGEKVEWLYEDGLRSYLVDAVSEFERLPSEPF
CGALAGNKEAVDWALLWLPEGGDAVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFR
SLLPRGVKLAPEDIWERIAFVLSMKMQDAQFSGQTKERLSSREAAAFVSGVVKDAFSLWL
NAHPELGQQLAELAISNANRRLKAGKKVERKRITQGPALPGKLADCAGQDPMRSELFLVE
GDSAGGSAKQARDKEFQAIMPLRGKILNTWEVDGSEVLASQEVHDIAVAIGIDPGSSDLA
QLRYGKICILADADSDGLHIATLLCALFVRHFRPLVDAGHVYVAMPPLYRIDLGKEIFYA
LDDAERDGILDRLVAEKRRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLEDYPG
TQEVMDMLLAKKRAGDRKSWLESKGNLAEVLL
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggcccagcagaacacctacaacgccgatgccatcgaagtcctttccggcctcgacccg
gtgcgcaagcgcccgggcatgtacaccgataccagccggcccaaccacctggctcaggaa
gtcatcgataacagcgtcgacgaggcgctggccgggcatgccaaatcgattcaggtgatc
ctgcacgaggacaactccctggaggtgctcgacgacgggcgcggcatgcccgtggacatt
cacccggaagagggcgtgccaggcgttgagctgatcctcaccaagctgcatgccggcggc
aagttcagcaacaagaactaccagttctctggcggcttgcatggcgtgggtatctcggtg
gtcaacgcgctgtcgacaagggtgctcgtcacggtcaagcgcgacggcaacgaataccag
atgagttttgccgacggcttcaaagccagcgatctggcggtgatcggcacagtcggaaag
cgcaacaccggtaccagtgtgcacttctggccggatgccaagtacttcgactcgcataag
ttttctgttagccgcctcaagcatgtgctcaaggccaaggccgtgctgtgtccggggctg
gcggtcagcttcgaggacaaggccagcggcgagaaagtcgagtggctgtatgaagacggc
ctgcgttcctacctggtggatgccgtcagtgaatttgaacgactgcccagtgagcccttc
tgcggcgcgctggccggcaacaaggaagccgtggactgggcgctgctgtggttgccggaa
ggcggcgacgcggtgcaggaaagctacgtcaacctgatccccaccgcgcagggcggcacc
cacgtcaatggtctgcgccagggtctgctggatgccatgcgcgagttctgcgagttccgc
agcctgctgccgcgcggggtcaagctggcacctgaagacatctgggagcgcattgccttt
gtcctgtcgatgaagatgcaggacgcgcagttctccgggcagaccaaggagcgcctgtcg
tcccgtgaagcggcggcatttgtctccggcgtggtcaaggatgccttcagcctgtggctt
aacgcccaccctgaactcggtcagcagctcgccgagttggcgatcagcaacgccaaccgc
cgcctcaaagccggcaagaaagtcgagcgtaaacgcatcactcaaggcccggcactgcct
ggcaaactggcggactgcgccgggcaggacccgatgcgttccgagctgtttctggtcgag
ggtgattccgccggtggctcggccaagcaggcgcgggacaaggagtttcaggccatcatg
ccgctgcgcgggaagatcctgaatacctgggaagtcgacggcagcgaagtgctggcttcg
caggaagtgcacgatatcgccgtggccatcggcatcgatccgggctccagtgatctggcc
cagctgcgctacggcaagatctgcatccttgccgacgccgactccgacggcctgcacatc
gccaccttgctgtgcgcgctgttcgtccgtcacttccgcccgctggtggatgccggtcac
gtttatgtagcgatgccgccgctgtaccgcatcgacctgggcaaggaaatcttctacgcc
ctggatgatgccgagcgcgatggcatccttgaccgcctggtggccgagaaacgccgtggc
aagccacaggtcacccgcttcaagggcctgggtgaaatgaatccgccacagttgcgcgaa
accaccatggacccgaacacccggcgtctggtgcaactgaccctggaggactatcccggc
actcaggaagtcatggacatgctgctggccaagaaacgcgccggtgaccgtaaatcctgg
ctggagtccaagggtaacctggccgaggtgctgctctga

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