Pseudomonas cimarronensis: ACOCLD_06525
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Entry
ACOCLD_06525 CDS
T11824
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pcim Pseudomonas cimarronensis
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcim03009
]
ACOCLD_06525
Enzymes [BR:
pcim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ACOCLD_06525
Ribosome biogenesis [BR:
pcim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACOCLD_06525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
DUF8729
Motif
Other DBs
NCBI-ProteinID:
XQW33223
LinkDB
All DBs
Position
1409566..1410135
Genome browser
AA seq
189 aa
AA seq
DB search
MAKAPPAEPRLLVLNKPFDVLTQFNDEQGRATLKNFVDVPGVYPAGRLDRDSEGLLLLTN
DGGLQARIADPKHKLAKTYWVQVEGEPNEAQLQQLRDGVQLNDGPTLPAEARLLDEPQLW
ERNPPVRFRKSIPTAWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPFSLDDLQPGQ
WREVPARLN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggcaccacctgccgagccgcgtttgctggtgctgaacaagccgttcgatgtg
ctgacccagttcaacgacgagcaaggtcgcgccaccctcaagaattttgtcgatgtgcct
ggcgtctatccggctggtcggctggaccgtgacagcgaaggtctgctgctgctaaccaat
gatggcggcctgcaggcgcgtatcgccgaccccaagcacaagctggcgaaaacctattgg
gtgcaggtagagggcgaaccgaacgaggcgcagttgcagcagctgcgcgacggtgtgcag
ttgaatgacggcccgaccctgccggccgaagcacggttactggatgagccgcagctgtgg
gaacgcaacccgccggtgcgttttcgtaaaagcatcccgacggcctggctggaactggtg
attcgtgaggggcgcaaccgtcaggtgcgacgcatgacggctgctgtgggcctgccgacc
ctgcgcctggtgcgcgtgcggatcggcccgttcagtctggatgatttacagccggggcag
tggcgcgaagtgccggcccggctgaattga
DBGET
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