Pseudomonas cimarronensis: ACOCLD_06895
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Entry
ACOCLD_06895 CDS
T11824
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACOCLD_06895 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcim03019
]
ACOCLD_06895 (groL)
03110 Chaperones and folding catalysts [BR:
pcim03110
]
ACOCLD_06895 (groL)
03029 Mitochondrial biogenesis [BR:
pcim03029
]
ACOCLD_06895 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcim04147
]
ACOCLD_06895 (groL)
Enzymes [BR:
pcim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACOCLD_06895 (groL)
Messenger RNA biogenesis [BR:
pcim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACOCLD_06895 (groL)
Chaperones and folding catalysts [BR:
pcim03110
]
Heat shock proteins
HSP60 / Chaperonin
ACOCLD_06895 (groL)
Mitochondrial biogenesis [BR:
pcim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACOCLD_06895 (groL)
Exosome [BR:
pcim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACOCLD_06895 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACOCLD_06895 (groL)
Exosomal proteins of breast cancer cells
ACOCLD_06895 (groL)
Exosomal proteins of colorectal cancer cells
ACOCLD_06895 (groL)
Exosomal proteins of bladder cancer cells
ACOCLD_06895 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XQW32636
LinkDB
All DBs
Position
1479328..1480971
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVVIEKSYGAPLITKDGVSVAKEI
ELKDKFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKEIKALSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDGPLLLLVDKKISNIRELLPVLEAV
AKSGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLSLESATLEHLGNAKRVILSKENTTVIDGAGAQVDIEARVAQIRKQVEDTTSDY
DKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAISELKGDNADQDVGIALLRRAVEAPLRQIVSNAGGEPSVVVDKVKQGSGNYGFNA
ATDTYGDMIEMGILDPAKVTRTALQAAASIASLMITTEAMIAEVAEDKPAAGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcactggcgtc
aacgttctggctgacgcagtaaaagccaccctcggcccgaaaggccgcaacgtggtgatc
gagaagagctacggcgctccgctgatcaccaaggacggcgtatcggttgccaaagaaatc
gagctgaaagacaagttcgaaaacatgggcgcgcagctggtcaaggacgttgcgtccaag
gccaacgacgctgctggtgacggcaccaccaccgcgaccgttctggctcaggccatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggatctgaagcgtggtatc
gacaaagccaccatcgccatcgttaaagaaatcaaagccctgtccaagccgtgcgcggac
accaaggcgattgcccaggttggcaccatctccgccaactccgacagctccatcggcgac
atcattgctgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagagggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaagccggacaccatggttgccgaactcgacggcccgctgctc
ctgctggtcgacaagaaaatctccaacatccgtgagctgctgccagttctggaagctgtt
gccaagtccggacgtccgctgctgatcgttgccgaagacgttgaaggcgaagctctggca
acgctggtggtgaacaacatgcgtggcatcgtcaaagtcgcggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaagccatgctgcaggacatcgccatcctgaccggcggtaccgtg
atctccgaagaagttggcctgagcctggagagcgcgaccctggagcacctgggtaacgcc
aagcgcgtgatcctgagcaaggaaaacaccaccgtgatcgacggtgctggtgcgcaggtt
gatatcgaagcccgcgttgcgcagatccgcaagcaggttgaagacaccacttctgactac
gacaaagagaagctgcaagagcgtctggccaagctggctggcggtgttgcggtaatcaag
gtcggtgctggcaccgaagtggaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtgcctggcggtggcgtggcgctggtg
cgttcgctgcaagccatcagcgagctgaaaggcgacaacgccgatcaggacgtcggtatt
gccctgctgcgccgtgctgttgaagcgccgctgcgtcagatcgtatccaacgccggtggc
gagccaagcgtcgtggtcgacaaggtcaagcaaggttcgggcaactacggcttcaacgcc
gctaccgacacctacggcgacatgatcgagatgggtattctcgacccggccaaggtcacc
cgtaccgcgctgcaggccgctgcctccatcgccagcctgatgatcaccaccgaagcgatg
atcgccgaagtggctgaagacaagccggctgctggcggtatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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