Pseudomonas cimarronensis: ACOCLD_07960
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Entry
ACOCLD_07960 CDS
T11824
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pcim Pseudomonas cimarronensis
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcim03036
]
ACOCLD_07960 (xerD)
Chromosome and associated proteins [BR:
pcim03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ACOCLD_07960 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
MrpR_C_cat
DUF3435
RhiE-like_linker
Motif
Other DBs
NCBI-ProteinID:
XQW32836
LinkDB
All DBs
Position
1713776..1714672
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AA seq
298 aa
AA seq
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MPAIDHPLIERFLESLWLEKGLSAHTRAAYRSDLALFNGWLQARDVQLVDAGRELVLDHL
AWRLNAGYKARSTARLLSGLRGFYRFLLREQLISRDPTLQVDLPQLGRPLPKSLSEADVE
ALLAAPELDDPIGLRDRAMLEVLYACGLRVSELIGLTLEQVNLRQGVLRVFGKGSKERLV
PLGEEAIAWIERYSKEARPFLLDGKPSDVLFPSQRGEQMTRQTFWYRIKHQAKVAGISKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctatcgaccatccactgattgagcgttttctggagtcgctctggctggaaaag
ggcttgtcagctcatacgcgggcggcgtatcgcagtgatctggcgttgttcaatggttgg
ttgcaggcgcgtgatgtacagctggtagatgctgggcgtgaacttgttctggatcacttg
gcctggcgcctgaatgcaggctacaaggcgcgctccacggcgcggctgctctcggggttg
cgcgggttctaccggtttcttctgcgtgaacagttgatcagtcgtgatccgaccttgcag
gttgacttgccgcagctggggcggccactgcccaagtcgctgtccgaagccgatgttgag
gcgttgctggctgcccccgagctggatgacccaataggtctgcgcgaccgggcgatgctg
gaggtgctatatgcctgcggtttgcgcgtgagcgagctaattggcctgacgctggagcag
gtcaatctgcgtcagggtgtgttgcgcgtattcggcaagggcagcaaggagcgcctggtg
ccgctgggtgaagaggcgattgcctggattgagcgctacagcaaggaggcgcggccgttt
ctgctggatggcaagcccagtgatgtgctgtttcccagtcagcgtggcgagcagatgacc
cggcaaaccttctggtaccgaatcaagcatcaggccaaggtggcggggatcagcaagagc
ctgtcgccgcacaccttgcgtcatgcgttcgccacccatttgctcaatcatggagctgat
ttgcgcgtggtacagatgctccttgggcacagtgacctgtcgaccacgcagatctacacc
catatcgcccgggcgcggttgcaagagctgcatgcgcagcaccacccgcgcggctga
DBGET
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