Pseudomonas cimarronensis: ACOCLD_09745
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Entry
ACOCLD_09745 CDS
T11824
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim00071
Fatty acid degradation
pcim00280
Valine, leucine and isoleucine degradation
pcim00310
Lysine degradation
pcim00362
Benzoate degradation
pcim00380
Tryptophan metabolism
pcim00410
beta-Alanine metabolism
pcim00640
Propanoate metabolism
pcim00650
Butanoate metabolism
pcim00907
Pinene, camphor and geraniol degradation
pcim00930
Caprolactam degradation
pcim01100
Metabolic pathways
pcim01110
Biosynthesis of secondary metabolites
pcim01120
Microbial metabolism in diverse environments
pcim01200
Carbon metabolism
pcim01212
Fatty acid metabolism
Module
pcim_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ACOCLD_09745 (fadB)
00650 Butanoate metabolism
ACOCLD_09745 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ACOCLD_09745 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ACOCLD_09745 (fadB)
00310 Lysine degradation
ACOCLD_09745 (fadB)
00380 Tryptophan metabolism
ACOCLD_09745 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ACOCLD_09745 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ACOCLD_09745 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ACOCLD_09745 (fadB)
00930 Caprolactam degradation
ACOCLD_09745 (fadB)
Enzymes [BR:
pcim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ACOCLD_09745 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ACOCLD_09745 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ACOCLD_09745 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ACOCLD_09745 (fadB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XQW33183
LinkDB
All DBs
Position
2099328..2101475
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQSVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGFE
MCLAADYRVMADSAKVGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIAGGKENKAADAL
KAGAVDAVVTADKLQAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANMARDKALEVEAAGFVKLAKTPVAASLIGLFLNDQEL
KKKAKQHDEIAKDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGNRVAKGRMTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEGVVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKTPVVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGRTAVDVMYEADRLGQKNGKGFYAYETDKRGKP
KKVSDPAAYELLKSIVTEQRELTDEDIINFMMIPLCMETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDTVGVAEFVALADKYAELGALYTPTAKLREMAANGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aaattcgacctcaagggtgaatccgtcaacaaattcaaccgtcttaccctcaatgagctg
cgtcaatccgttgatgcaatcaaggctgatggttcgatcaagggcgtgattgtcaccagt
ggcaaagacgtatttatcgtcggtgccgacatcaccgaattcgtcgacaacttcaagttg
ccggacgaagagctggtggctggcaacctcgaagccaacaagatcttcagtgattttgaa
gacctcaatgttccgactgttgtcgcgatcaatggcatcgccctgggcggtggttttgaa
atgtgcctggcggcggattaccgcgtcatggctgacagtgccaaggttggtctgccggaa
gtcaaactgggcatctacccaggcttcggcggtactgtgcgtctgccacgtgttatcggt
accgataacgctgttgagtggattgccggtggtaaggaaaacaaagcagctgacgccctg
aaagccggcgccgtcgacgctgtagtgactgctgataagctgcaagctgcagccctggat
ctgatcaagcgcgccatctccggtgagctggactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgctattgagcagatgatgtgctttgaaaccgccaaaggtttc
gtcgcaggtcaggccggcccgaactacccggctccggttgaagcgatcaagactatccag
aaagccgccaacatggcgcgcgacaaagctctggaagttgaagctgcaggtttcgtcaaa
ctggccaagactccggttgctgcaagcctgatcggtctgttcctgaacgatcaggaactg
aagaaaaaagccaagcagcacgacgaaatcgccaaagacgtgaaactggctgccgtactc
ggtgctggcattatgggcggcggtatcgcttaccagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgtgaagagggtatccagatggggctgaatgaggcgagcaagctg
ctcggcaaccgtgtcgccaaaggtcgcatgaccccggcgaagatggctgaagccctcaat
ggcatccgtccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgttgaagcc
gtcgtcgagaacccgaaggtcaagcagatcgtgctggctgaagtggagggcgtggttaaa
gaagacgccatcctcgcgtccaacacctcgaccatttccatcaacttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggtatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgattcgtggcgagaagtccagcgacgtagccgtggcgaccaccgttgcc
tacgccaagaaaatgggcaagaccccggttgtagtcaacgattgcccgggcttcctggtt
aaccgcgtgctgttcccgtacttcggtggcttctccaagctgctgggcttcggtgtggac
ttcgtgcgtatcgacaaggtcatggagaagttcggctggccgatgggcccggcgtacctg
tccgacgtggttggtatcgacaccggtcaccacggtcgtgacgtaatggctgaaggcttc
ccggatcgcatggcggttgaaggccgtactgcggttgacgtgatgtacgaagcggatcgt
ctgggtcagaagaacggcaagggtttctatgcctacgagactgacaagcgcggtaagccg
aagaaagtctccgacccggctgcctatgagctgctgaagtcgatcgtcactgagcagcgc
gagctgactgacgaagatatcatcaacttcatgatgatcccgctgtgcatggaaaccgtg
cgttgtctggaagacggcatcgttgataccgcagctgaggccgatatgggcctgatctac
ggcatcggcttccctccgttccgcggtggtgcactgcgttacatcgatactgtcggtgta
gccgagttcgttgccctggccgacaaatacgccgagctgggcgcgctgtacaccccgact
gccaagcttcgcgaaatggccgctaacggccagaagtttttcggttaa
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