Pseudomonas cimarronensis: ACOCLD_13810
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Entry
ACOCLD_13810 CDS
T11824
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03030
DNA replication
pcim03430
Mismatch repair
pcim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOCLD_13810 (dnaQ)
03430 Mismatch repair
ACOCLD_13810 (dnaQ)
03440 Homologous recombination
ACOCLD_13810 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcim03032
]
ACOCLD_13810 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pcim03400
]
ACOCLD_13810 (dnaQ)
Enzymes [BR:
pcim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOCLD_13810 (dnaQ)
DNA replication proteins [BR:
pcim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOCLD_13810 (dnaQ)
DNA repair and recombination proteins [BR:
pcim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOCLD_13810 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XQW30241
LinkDB
All DBs
Position
complement(2968830..2969573)
Genome browser
AA seq
247 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDREIDEGAIAVHGIT
NEFVKDKPRFKDVADEFFEFIKGAQLIIHNAAFDVGFINNEFALIKQDERADISEHCSIL
DTLMMARERHPGQRNNLDALCKRYGVDNSGRDLHGALLDAEILADVYLTMTGGQTNLSLA
GDGSEGDSNGRQQPSAIRRLPADRALTRVIRANGEELDAHLARLAIIEKSAGAPPLWVLL
EQPKAEA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagtgtggtgctggatactgaaaccaccggtatgccggtgaccgatggtcaccgg
atcatcgagatcggttgcgttgagctgatggggcgacgcctgaccgggcggcattttcac
gtctacctgcagccggaccgtgagatcgacgaaggcgcgattgcggttcacggcatcacc
aacgagttcgtcaaggacaagccgcgcttcaaggatgtggccgatgagttcttcgagttc
atcaagggtgcgcagctgatcattcacaacgcggcgttcgacgttggctttatcaacaac
gaattcgccctgatcaagcaagatgaacgcgccgacatcagcgagcactgctcaatcctc
gacaccctgatgatggcccgcgagcgccacccggggcagcgcaacaacctcgatgcgctg
tgcaaacgctatggtgtcgacaactccggccgtgacctgcacggcgccttgctcgatgcc
gagattctcgccgacgtctacctgacaatgaccggcggacagaccaacctctccctggcc
ggtgacggctcggaaggcgacagcaatggtcgtcagcagcccagcgcgattcgccgtctg
cccgctgatcgggccctgacacgggtgattcgggccaatggtgaagagctggatgcccat
ctggcacgcctggcgattatcgagaagtcagcaggtgcgccgccgctttgggtgctgctg
gaacagcccaaggccgaggcctga
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