Pseudomonas cimarronensis: ACOCLD_18910
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Entry
ACOCLD_18910 CDS
T11824
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcim Pseudomonas cimarronensis
Pathway
pcim03030
DNA replication
pcim03430
Mismatch repair
pcim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOCLD_18910 (holA)
03430 Mismatch repair
ACOCLD_18910 (holA)
03440 Homologous recombination
ACOCLD_18910 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcim03032
]
ACOCLD_18910 (holA)
03400 DNA repair and recombination proteins [BR:
pcim03400
]
ACOCLD_18910 (holA)
Enzymes [BR:
pcim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOCLD_18910 (holA)
DNA replication proteins [BR:
pcim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOCLD_18910 (holA)
DNA repair and recombination proteins [BR:
pcim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOCLD_18910 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
LRR_RI_capping
Motif
Other DBs
NCBI-ProteinID:
XQW31173
LinkDB
All DBs
Position
4044444..4045478
Genome browser
AA seq
344 aa
AA seq
DB search
MKLNSAQLGKHLQGNLSPVYVVSGDEPLLCQEAADAIRAATRQQGFSERQVFNADNNFDW
GNLLQAGASLSLFADKRLLELRLPNGKPGDKGAAALLEYLARPAEDTVLLISLPKLDGSA
QKTKWGKALIEGAQTQFVQIWPVEASQLPQWIRQRLAQSGLSASAEAVDMIAVRVEGNLL
AAAQEIEKLKLLAEGTQIDVDTVHASVADSARFDVFGLIDAALNGEAAHALRMLEGLRGE
GVEPPVILWALAREIRLLATIAQQYAQGMPLEKAFSSARPPVWDKRRPLVSKALQRLSAS
RWAALLQDAQQIDAQIKGQAPGDPWSGLGLLTLNICGQRLGLNR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaattccgcacaactcggcaaacacctgcagggcaacctgagcccggtttac
gtggtcagcggtgatgaaccgctgctctgccaggaagccgccgatgccattcgcgccgcg
acccgccaacagggtttcagcgagcgtcaggtgttcaacgccgacaacaacttcgactgg
ggcaacctgctacaggccggcgccagcctgtcactgttcgccgacaaacgcctgctggaa
ctgcgcctgcccaacggcaagcccggcgacaagggagcagccgcgctgctggaatacctc
gcccgccccgccgaagacaccgtgctgctgatcagcctgcccaagctcgatggcagcgca
cagaagaccaaatggggcaaggcgctgatcgaaggcgcgcagacgcagttcgtgcaaatc
tggccggtcgaggccagccagctgccgcagtggattcgccagcgcctggcgcaatcaggc
ctcagtgccagcgccgaagccgtggacatgattgccgtacgcgtcgaaggcaacctgctc
gccgccgcccaggaaatcgaaaagctcaagctgctcgccgaaggcacgcagatcgacgtc
gacaccgtacacgcctcggtcgccgacagcgcacgcttcgatgtattcggcctgatcgac
gcggctctgaatggcgaagccgcccacgccctgcgcatgctcgaagggctgcgcggcgaa
ggcgtcgaaccaccggtgattctctgggccctggcccgcgaaatacgcctgctggcaacc
atcgcccagcagtacgctcagggcatgcccctggaaaaagccttcagttcggcccgcccc
cccgtttgggacaagcgccggccactggtcagcaaagccctgcaacgcctgtccgcctca
cgctgggcggccttgctgcaggacgctcaacagatcgacgcacagatcaaggggcaagcg
ccaggcgatccctggagcggcctgggcctgctgactttgaacatctgcggccagcgcctg
ggcctgaaccgctaa
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