Prosopis cineraria: 129285270
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Entry
129285270 CDS
T09047
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129285270
09122 Translation
03013 Nucleocytoplasmic transport
129285270
03015 mRNA surveillance pathway
129285270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129285270
03041 Spliceosome [BR:
pcin03041
]
129285270
03009 Ribosome biogenesis [BR:
pcin03009
]
129285270
03012 Translation factors [BR:
pcin03012
]
129285270
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129285270
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129285270
mRNA cycle factors
Stress granule specific factors
129285270
Spliceosome [BR:
pcin03041
]
Complex C
Other components
EJC/TREX
129285270
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
90S particles
Helicases
129285270
Translation factors [BR:
pcin03012
]
Eukaryotic type
Initiation factors
eIF-4
129285270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Cas3-like_C_2
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-GeneID:
129285270
NCBI-ProteinID:
XP_054776842
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAAAATTSVVPANRRRIMNPQEDMEFETTEGIEPISSFENMGIKEDLLRGIYAYGFEKPS
AIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSIREVQVLIVSPTRELASQT
EKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVK
RDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNF
TVSSMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcggctacaacgtcggtggtgccggctaaccgccggcggattatgaatccg
caggaggatatggagttcgagaccaccgaaggaatagagcctatctcgagcttcgagaac
atgggtatcaaggaggatctgctccgaggcatctatgcatatggcttcgagaagccctcg
gcaatccagcagcgagccgttagacctattattgaagggcgagatgttatcgctcaggcc
caatctggtactggcaagacgtctatgattgctctcaccgtttgccaagtcgtcgatact
tctattagagaagtccaggtgttgatcgtgtcaccaacaagagaattggcctcccagact
gaaaaggttatcttggctattggagattacataaatatacaagctcatgcatgcattgga
ggtaaaagtgtaggtgaagacatacggaagcttgagtatggggttcatgtggtttctgga
actcctggacgagtttgtgacatgataaaaaggagaacattgcgaactagagccatcaaa
ttgttagtccttgacgaatctgatgaaatgttgagcagagggttcaaggatcagatctat
gatgtgtatagatatctccctccggagcttcaggttgtcttgatttctgccacccttcct
catgaaatattggagatgacaaataagttcatgacagatcctgtaaggatcctcgtaaaa
cgtgatgaattgactttggagggcatcaagcaattttttgtggctgttgaaagggaagat
tggaagtttgatactttatgtgatctttatgataccctcaccatcacacaagctgttatt
ttttgcaacaccaagcggaaggttgactggttgactgagaaaatgcgtaacaacaatttc
actgtctcatcaatgcatggggacatgcctcagaaagaaagagatgcgatcatgggagag
tttcgtgctggtacaactcgtgtacttatcacaacagatgtttgggctcgtggtcttgat
gtgcagcaggtctctctagtgataaactatgaccttccaaataatcgagagctttatatt
catcgtattggtcgatctgggcgctttggacgcaagggtgttgctattaacttcgtcaag
agcgatgacatcaagatcctgagagatattgagcaatattacagtacacagattgatgaa
atgccaatgaatgttgctgatctcatataa
DBGET
integrated database retrieval system
