Prosopis cineraria: 129285633
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Entry
129285633 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic-like
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pcin03012
]
129285633
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129285633
Translation factors [BR:
pcin03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129285633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
Helicase_C
HA2_C
HA2_N
DSRM_DHX29
nSTAND3
AAA_22
DND1_DSRM
dsrm
ATPase
Motif
Other DBs
NCBI-GeneID:
129285633
NCBI-ProteinID:
XP_054777361
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MPPKKNKQKPKANSASSSKAKSQSSSSGPRLQISAENENRLRRLLLNSGRSTPSLPATDD
VLTKAQKAKKLKAVYEKLSCEGFGNDQIELALSTLKEGATFESALDWLCLNLPGNELPLQ
FSSGTSLHSNEGGSVGVILNQRDDWTPLVNQSITNKQESREFSVIVKRQWDDDTLDSRQP
SQADWIRQYVEQEEDDEQNTWEDDILEERSAKKEAWEPRSYDVIAKEYLSARMEAAKAKE
XGDKKSQGQAGNIIRKLKQELSALGLSDEALAVQHELEIASKSTPGRRSSGPEPVDCTEE
EIPCDTGGYSTVILPSGEISVDKGDAKQHNVKENPANSDTSGAQVVKKDSSQEEADDVEL
GGFFLEDAQSHEMLPSDNILEIQKQEKIKKLCEKNLEKLDGIWKMGDPPKIPKAVLHQLC
QKSGWEAPKFDKVPGRGKSFSYAVNILRKASGRGKNRKAGGLVTLQLPDGDEGSESAEDA
QNKVAAYALFQLFPDIPVHLPIMEPYASVVMQWMKGDSSARIEEREEDRRSGFVDSLLNA
DGSSEPKHVDDTYYKGPENFDTLVKNKNMTPASVEPKAQRKTYSVDKESSDLKQAHYEKM
RTQRYQAMLKSRAALPIAVLKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIEAG
CGGYCNIVCTQPRRIAAISVAERVSAERCEPSPGSDGSLVGYQVRLDSARNEKTKLLFCT
TGILLRRLMGDNSLTGISHVIVDEVHERSLLGDFLLIVLKNLIERQSIESSTRLKVILMS
ATVDSSLFSKYFGGCPVVTAEGRTHPVTTCFLEDIYDQINYRVASDSPASLAYDAFPKEK
RGPVTNSRGKKNLVLSAWGDESLLSEQQINPCFISTNYESYSEQTQQNLKRLNEDVIDYD
LLEDLICYIDETCDEGAILVFLPGVSEISLLHDKLAASYRFGGQSSDWIIPLHSLVSPTE
QKRVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLSSMVEDWIS
QANARQRRGRAGRVRPGICFCLYTHHRFEKLMRSYQVPEMLRMPLVELCLQVKLLSLGHI
KPCLSKALEPPKVEAINSAVSLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAI
FGCLSPILSISAFLSYKSPFVYPKDEKQNVERSKLMLLNEKLDGPGDSNVDRQSDHLLMM
TAYKRWERILTERGVKAAQQFCNSYFLSSSVMYMIREMRIQLGTLLADIGLINLPKGYQM
DGKKKGNLDNYLCDASQPFNIYANHSSIVKAILCAGLYPNVAASEQGIVATVLSSLRQSS
SSANTDRAVWYDGRREVHIHPSSINSSSKAFQYPFLVFLEKVETNRIFLRDTSIISPYSI
LLFGGSINVQHQTGLVIIDGWLRLTAPAQIAVLFKELRVTLHSILKELIRKPETGIALNN
EIIKSIINLLLEEGGVPK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagaagaacaagcagaagccgaaagccaactcagcttcatcgtcaaaagca
aagtcgcagtcctcctcatccggtccgaggctgcaaatttcggccgagaacgagaaccgc
ctccgccgcctcttgctcaactctggcaggtccacgccatctcttcctgcgacggacgat
gtcctgaccaaggctcagaaggcgaagaagctcaaagctgtttatgagaagctctcttgt
gaaggtttcggtaatgatcagattgagcttgctctttccactctcaaggaaggtgctaca
ttcgagtctgcgcttgattggttatgcttgaatttgccagggaatgagctgccattgcag
ttttcttctggaacctcgttgcattctaatgaaggaggttctgttggtgttatattaaat
caacgggatgattggactcctttggtgaatcaatctattacgaataagcaagaaagtcga
gaattttctgttattgtcaagagacagtgggatgatgatactttagattctcgccagcca
tctcaagcagattggatcaggcaatatgtggagcaagaggaagatgatgaacaaaacact
tgggaagatgacattcttgaggagagaagtgccaagaaggaggcctgggagcctagatct
tatgatgttattgccaaagagtacctttctgcaaggatggaagccgcgaaagctaaggaa
ncaggggacaagaaaagtcaggggcaggcaggcaatattatcagaaaactgaaacaagaa
ttgtctgctctagggttatcagatgaagctttggctgtacagcatgagcttgaaatagct
tctaaatccacacctgggagaagatcttcaggtcctgagcctgttgattgcactgaagaa
gaaattccgtgtgatactggaggttattcaactgttattttgccatctggtgagatatca
gttgataaaggtgatgcaaagcaacataatgtgaaggaaaatcctgctaattctgatacg
tctggtgcacaagttgttaaaaaggattcttctcaagaagaggcagatgatgttgaatta
ggtggtttctttttggaggatgcccaatctcatgaaatgttgccttctgataatattttg
gaaatacagaagcaagaaaaaataaaaaaattatgtgagaagaatttggagaagttagat
ggcatttggaaaatgggggaccctcccaaaattccaaaggctgttcttcatcaactatgc
caaaaatcagggtgggaagctccaaaattcgataaagttcctggcagaggaaagagtttc
tcctatgctgtcaacatattgcgcaaagcaagtgggaggggtaagaaccggaaagctggg
gggctggtcacacttcagcttcctgatggagatgaaggttctgaatctgctgaggacgca
cagaataaagtggcagcgtatgctttgttccagctgtttcctgatatccctgtacacctc
ccaattatggagccatatgcttcagttgtgatgcagtggatgaaaggagactcatcagca
aggattgaagaaagggaggaagatcgtcggtcaggatttgttgattcacttttgaatgct
gatggctctagtgagcctaaacatgttgatgatacatattacaagggtccagaaaatttt
gatacactcgtcaaaaataaaaacatgactcctgccagtgttgaaccaaaagctcagaga
aaaacctatagtgtggacaaggagagttcggatttgaagcaggcacactatgagaaaatg
agaacccagagataccaggccatgttgaaaagtagagctgcgcttcctattgctgtgcta
aaaggtgacatattacaattgctgaaggaaaatgatgtccttgttgtttgtggggaaaca
ggctctggaaagacaactcaggtcccacaatttatattggatgacatgattgaagcaggc
tgtggtggatactgtaatatcgtctgcacacagccaaggagaattgcggctatttctgtt
gctgaaagggtttcggctgagaggtgtgaaccatcaccaggttcagatggttccttggtt
ggttatcaagtccggctcgacagtgccaggaatgaaaaaacaaagcttctgttttgtaca
acgggcatccttctgcgaagattgatgggggataacagcttgactggcatctctcatgtc
atagttgatgaagtgcatgagaggtctctgttgggtgattttcttcttattgttttaaaa
aatctgattgagaggcagtccattgaaagctccacaagactgaaggtcattctaatgtct
gcaacagttgattcaagtttattttcaaaatacttcggtggttgccctgtagttactgca
gaaggcagaactcatcctgtgacaacttgttttctcgaagatatatatgatcagatcaat
tatcgggttgcttctgattctccagcttctttagcatatgatgcctttcccaaagagaag
agaggtcctgtgacaaatagcagggggaagaagaatttagtcttatctgcatggggtgat
gagtctctgctttctgaacaacaaattaatccatgttttatttcaactaattatgaatca
tacagtgaacaaacccaacagaatttgaaaagattgaatgaagatgtcattgattatgac
cttcttgaagatctgatatgctacattgatgaaacttgtgatgagggtgccatacttgta
tttttacctggtgtgtctgaaataagcctattacatgacaagctggcagcttcataccga
tttggggggcagtcctctgattggattattcctctgcattcactggtttcaccaactgaa
cagaaaagggtatttttacgacctccaggaaatatacgcaaggttgttatagccacaaat
attgcagagactagcataacaatagatgatgtgatatatgtaatagactgtggaaaacat
aaggagaatcggtacaatccacagaagaaattgtcaagcatggttgaagattggatatct
caagcgaatgcaaggcaacgccggggcagagctgggcgtgtaagacctggaatttgcttt
tgtttgtacactcatcacagatttgaaaaactcatgcgttcttaccaggtacctgagatg
cttcggatgccattagttgaattatgtttacaggttaaattattgtctcttggtcatatc
aagccatgtttgtccaaggctttagaacctcctaaggttgaagcaataaattcagctgta
tctttgttgtacgaggttggtgctcttgaaggagatgaagagttgacgcctcttgggcat
catttggcaaaacttcctgtggatgtattaattggaaagatgatgctgtatggggcaata
tttggttgcttgtcaccaattctttcaatttcagcatttttaagctacaagtctccattt
gtatatccaaaggatgagaagcaaaatgttgaaagatcgaagttaatgttgttgaatgaa
aagctagatggaccaggtgactcaaatgttgatcggcaatctgaccacttactaatgatg
actgcatataaaagatgggagaggattttgactgagagaggagttaaggctgcccaacaa
ttctgcaattcatattttttgagcagctctgtgatgtatatgataagggagatgagaata
cagcttggaactttgctggcagacatagggctcatcaatctacctaaaggttatcagatg
gatggaaagaagaaagggaatcttgacaactacctttgtgatgcatcacaaccatttaat
atatatgcaaatcattcatccattgtgaaggcaattctatgtgctggattataccccaat
gtagcagccagtgaacaaggtattgttgcaacagttctgagtagccttaggcagtcttct
agctctgcaaacactgaccgtgcagtctggtatgatggaagaagagaagttcatatccac
ccttcatctatcaacagcagctcaaaagcattccagtaccccttccttgtcttccttgaa
aaggttgaaacgaacagaatatttctgcgagatacttcaatcatttctccttactctatt
ttgctctttgggggctcaattaatgttcagcatcagactggactggtcatcatcgatgga
tggttgagattaactgctcctgcccaaatagctgtcttgtttaaggagctacgtgtgact
cttcattccattctgaaggaactcattagaaaaccagagactgggattgctctaaataat
gagatcatcaagtctatcatcaatcttctgttagaagaaggcggtgtccctaaataa
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